Protein–RNA interactions for Protein: A0N8N6

Trav12-2, T cell receptor alpha variable 12-2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-2A0N8N6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Gm27389-201ENSMUST00000183622 195 ntBASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Gm37722-201ENSMUST00000193757 208 ntBASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Gm21559-201ENSMUST00000220638 855 ntBASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Gm8587-201ENSMUST00000076538 843 ntBASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav12-2A0N8N6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-2A0N8N6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Gm6433-201ENSMUST00000118634 875 ntBASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-2A0N8N6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-2A0N8N6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-2A0N8N6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-2A0N8N6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-2A0N8N6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms