Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Ccdc112A0AUP1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Ccdc112A0AUP1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc112A0AUP1 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Ccdc112A0AUP1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc112A0AUP1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc112A0AUP1 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc112A0AUP1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc112A0AUP1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc112A0AUP1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.58■□□□□ 0.56
Ccdc112A0AUP1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc112A0AUP1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc112A0AUP1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Ccdc112A0AUP1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc112A0AUP1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc112A0AUP1 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Ccdc112A0AUP1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc112A0AUP1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Gm11336-201ENSMUST00000118168 334 ntBASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Gm29707-201ENSMUST00000196325 491 ntBASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Gm7213-201ENSMUST00000215977 950 ntBASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Gm30025-201ENSMUST00000218555 728 ntBASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Gm10566-201ENSMUST00000086739 996 ntBASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc112A0AUP1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.56■□□□□ 0.56
Ccdc112A0AUP1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc112A0AUP1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc112A0AUP1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc112A0AUP1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc112A0AUP1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc112A0AUP1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc112A0AUP1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc112A0AUP1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc112A0AUP1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc112A0AUP1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc112A0AUP1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc112A0AUP1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc112A0AUP1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc112A0AUP1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Gm27011-201ENSMUST00000182352 972 ntBASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc112A0AUP1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms