Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap99A0A140LIX9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Cfap99A0A140LIX9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Cfap99A0A140LIX9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Cfap99A0A140LIX9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap99A0A140LIX9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap99A0A140LIX9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cfap99A0A140LIX9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.39■□□□□ 0.69
Cfap99A0A140LIX9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap99A0A140LIX9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.39■□□□□ 0.69
Cfap99A0A140LIX9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.39■□□□□ 0.69
Cfap99A0A140LIX9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.39■□□□□ 0.69
Cfap99A0A140LIX9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cfap99A0A140LIX9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.39■□□□□ 0.69
Cfap99A0A140LIX9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap99A0A140LIX9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap99A0A140LIX9 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.39■□□□□ 0.69
Cfap99A0A140LIX9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap99A0A140LIX9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap99A0A140LIX9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cfap99A0A140LIX9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap99A0A140LIX9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap99A0A140LIX9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap99A0A140LIX9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap99A0A140LIX9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap99A0A140LIX9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap99A0A140LIX9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap99A0A140LIX9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap99A0A140LIX9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap99A0A140LIX9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap99A0A140LIX9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.38■□□□□ 0.69
Cfap99A0A140LIX9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap99A0A140LIX9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Cfap99A0A140LIX9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap99A0A140LIX9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cfap99A0A140LIX9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap99A0A140LIX9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.38■□□□□ 0.69
Cfap99A0A140LIX9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap99A0A140LIX9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cfap99A0A140LIX9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.38■□□□□ 0.69
Cfap99A0A140LIX9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap99A0A140LIX9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap99A0A140LIX9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
Cfap99A0A140LIX9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap99A0A140LIX9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap99A0A140LIX9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.38■□□□□ 0.69
Cfap99A0A140LIX9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap99A0A140LIX9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 Gm12644-201ENSMUST00000119935 606 ntBASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 Gm29707-201ENSMUST00000196325 491 ntBASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.37■□□□□ 0.69
Cfap99A0A140LIX9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap99A0A140LIX9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap99A0A140LIX9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap99A0A140LIX9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap99A0A140LIX9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap99A0A140LIX9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap99A0A140LIX9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap99A0A140LIX9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cfap99A0A140LIX9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap99A0A140LIX9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap99A0A140LIX9 Rprl3-201ENSMUST00000157400 290 ntBASIC19.36■□□□□ 0.69
Cfap99A0A140LIX9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap99A0A140LIX9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap99A0A140LIX9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap99A0A140LIX9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap99A0A140LIX9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap99A0A140LIX9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap99A0A140LIX9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap99A0A140LIX9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap99A0A140LIX9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap99A0A140LIX9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap99A0A140LIX9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap99A0A140LIX9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap99A0A140LIX9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cfap99A0A140LIX9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms