Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm5587-201ENSMUST00000206270 674 ntBASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Dancr-204ENSMUST00000132389 2347 ntBASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm9013-201ENSMUST00000132939 882 ntBASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm27704-201ENSMUST00000185094 107 ntBASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm37025-201ENSMUST00000195159 829 ntBASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm9731-201ENSMUST00000209480 747 ntBASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm7213-201ENSMUST00000215977 950 ntBASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm7370-201ENSMUST00000219471 767 ntBASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-4A0A0G2JG01 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13n-4A0A0G2JG01 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13n-4A0A0G2JG01 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13n-4A0A0G2JG01 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13n-4A0A0G2JG01 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.3
Trav13n-4A0A0G2JG01 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13n-4A0A0G2JG01 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13n-4A0A0G2JG01 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13n-4A0A0G2JG01 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Mir1668-201ENSMUST00000184114 107 ntBASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-4A0A0G2JG01 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav13n-4A0A0G2JG01 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms