Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav19A0A0B4J1K4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav19A0A0B4J1K4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav19A0A0B4J1K4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav19A0A0B4J1K4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav19A0A0B4J1K4 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav19A0A0B4J1K4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav19A0A0B4J1K4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav19A0A0B4J1K4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav19A0A0B4J1K4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav19A0A0B4J1K4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav19A0A0B4J1K4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav19A0A0B4J1K4 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Gm12085-201ENSMUST00000119263 940 ntBASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Gm15378-201ENSMUST00000121894 207 ntBASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav19A0A0B4J1K4 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav19A0A0B4J1K4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms