Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Asic1-205ENSMUST00000228185 1818 ntBASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gm43799-201ENSMUST00000201845 579 ntBASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Mir5130-201ENSMUST00000175160 84 ntBASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gm18959-201ENSMUST00000208954 655 ntBASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-47A0A0A6YY41 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gm13186-201ENSMUST00000118031 316 ntBASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gm15565-201ENSMUST00000118890 427 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms