Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.97□□□□□ -0.01
Ighv1-42A0A0A6YY38 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-42A0A0A6YY38 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-42A0A0A6YY38 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-42A0A0A6YY38 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Ighv1-42A0A0A6YY38 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-42A0A0A6YY38 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-42A0A0A6YY38 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Ighv1-42A0A0A6YY38 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-42A0A0A6YY38 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-42A0A0A6YY38 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-42A0A0A6YY38 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-42A0A0A6YY38 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-42A0A0A6YY38 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Ighv1-42A0A0A6YY38 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ighv1-42A0A0A6YY38 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-42A0A0A6YY38 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Ighv1-42A0A0A6YY38 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-42A0A0A6YY38 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ighv1-42A0A0A6YY38 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-42A0A0A6YY38 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-42A0A0A6YY38 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-42A0A0A6YY38 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-42A0A0A6YY38 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-42A0A0A6YY38 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-42A0A0A6YY38 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-42A0A0A6YY38 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ighv1-42A0A0A6YY38 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.96□□□□□ -0.01
Ighv1-42A0A0A6YY38 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.96□□□□□ -0.01
Ighv1-42A0A0A6YY38 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-42A0A0A6YY38 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.96□□□□□ -0.01
Ighv1-42A0A0A6YY38 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-42A0A0A6YY38 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-42A0A0A6YY38 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-42A0A0A6YY38 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.96□□□□□ -0.01
Ighv1-42A0A0A6YY38 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-42A0A0A6YY38 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-42A0A0A6YY38 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-42A0A0A6YY38 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-42A0A0A6YY38 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-42A0A0A6YY38 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ighv1-42A0A0A6YY38 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Ighv1-42A0A0A6YY38 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ighv1-42A0A0A6YY38 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Ighv1-42A0A0A6YY38 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ighv1-42A0A0A6YY38 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-42A0A0A6YY38 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-42A0A0A6YY38 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-42A0A0A6YY38 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-42A0A0A6YY38 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.95□□□□□ -0.02
Ighv1-42A0A0A6YY38 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.95□□□□□ -0.02
Ighv1-42A0A0A6YY38 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-42A0A0A6YY38 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-42A0A0A6YY38 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-42A0A0A6YY38 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.95□□□□□ -0.02
Ighv1-42A0A0A6YY38 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-42A0A0A6YY38 Mir5126-201ENSMUST00000175513 77 ntBASIC14.95□□□□□ -0.02
Ighv1-42A0A0A6YY38 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-42A0A0A6YY38 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Ighv1-42A0A0A6YY38 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-42A0A0A6YY38 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ighv1-42A0A0A6YY38 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.95□□□□□ -0.02
Ighv1-42A0A0A6YY38 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Ighv1-42A0A0A6YY38 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-42A0A0A6YY38 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-42A0A0A6YY38 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-42A0A0A6YY38 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ighv1-42A0A0A6YY38 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ighv1-42A0A0A6YY38 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ighv1-42A0A0A6YY38 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv1-42A0A0A6YY38 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv1-42A0A0A6YY38 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv1-42A0A0A6YY38 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Ighv1-42A0A0A6YY38 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv1-42A0A0A6YY38 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv1-42A0A0A6YY38 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv1-42A0A0A6YY38 Gm15173-201ENSMUST00000122049 433 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms