Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-5A0A075B6B5 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-5A0A075B6B5 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-5A0A075B6B5 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-5A0A075B6B5 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 App-207ENSMUST00000227737 2827 ntBASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-5A0A075B6B5 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav6-5A0A075B6B5 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms