Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Gm44291-201ENSMUST00000203102 2865 ntBASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Gm43060-201ENSMUST00000200621 289 ntBASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Gm10584-201ENSMUST00000207036 2628 ntBASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav3-4A0A075B654 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Gm9959-201ENSMUST00000068277 390 ntBASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav3-4A0A075B654 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms