Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Gm37856-201ENSMUST00000191634 999 ntBASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Trmt13-210ENSMUST00000198454 880 ntBASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.31□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Gm15378-201ENSMUST00000121894 207 ntBASIC13.31□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Actl10-202ENSMUST00000226583 1501 ntBASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Gm12441-201ENSMUST00000121806 588 ntBASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Gm10698-201ENSMUST00000182663 604 ntBASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms