Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Gm37736-201ENSMUST00000193564 2802 ntBASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav8-1A0A075B641 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav8-1A0A075B641 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav8-1A0A075B641 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav8-1A0A075B641 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC11.71□□□□□ -0.53
Trav8-1A0A075B641 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav8-1A0A075B641 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav8-1A0A075B641 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav8-1A0A075B641 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav8-1A0A075B641 Gm10418-201ENSMUST00000100943 576 ntBASIC11.71□□□□□ -0.53
Trav8-1A0A075B641 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav8-1A0A075B641 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav8-1A0A075B641 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav8-1A0A075B641 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Trav8-1A0A075B641 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav8-1A0A075B641 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav8-1A0A075B641 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav8-1A0A075B641 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Trav8-1A0A075B641 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav8-1A0A075B641 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav8-1A0A075B641 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav8-1A0A075B641 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
Trav8-1A0A075B641 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav8-1A0A075B641 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Nespas-201ENSMUST00000143738 1083 ntBASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav8-1A0A075B641 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Gm6420-201ENSMUST00000193885 723 ntBASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms