Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Gm11249-201ENSMUST00000117071 859 ntBASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Gm5874-201ENSMUST00000096101 508 ntBASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 App-207ENSMUST00000227737 2827 ntBASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav4-2A0A075B638 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.9□□□□□ -0.35
Trav4-2A0A075B638 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Gm10849-201ENSMUST00000100397 618 ntBASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-2A0A075B638 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Gm18958-201ENSMUST00000174258 762 ntBASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Il3ra-202ENSMUST00000223589 738 ntBASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Actl10-202ENSMUST00000226583 1501 ntBASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-2A0A075B638 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms