Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trav16nA0A075B634 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav16nA0A075B634 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav16nA0A075B634 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Trav16nA0A075B634 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16nA0A075B634 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16nA0A075B634 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.33□□□□□ -0.44
Trav16nA0A075B634 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16nA0A075B634 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16nA0A075B634 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav16nA0A075B634 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16nA0A075B634 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16nA0A075B634 Gm18284-201ENSMUST00000172604 624 ntBASIC12.33□□□□□ -0.44
Trav16nA0A075B634 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav16nA0A075B634 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16nA0A075B634 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16nA0A075B634 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav16nA0A075B634 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16nA0A075B634 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16nA0A075B634 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16nA0A075B634 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16nA0A075B634 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16nA0A075B634 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16nA0A075B634 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16nA0A075B634 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav16nA0A075B634 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Prob1-201ENSMUST00000097619 3021 ntBASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Gm12933-201ENSMUST00000120203 872 ntBASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Gm27405-201ENSMUST00000184201 112 ntBASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.32□□□□□ -0.44
Trav16nA0A075B634 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16nA0A075B634 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav16nA0A075B634 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav16nA0A075B634 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav16nA0A075B634 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav16nA0A075B634 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav16nA0A075B634 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav16nA0A075B634 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav16nA0A075B634 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms