Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8n-2A0A075B633 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.86□□□□□ -0.03
Trav8n-2A0A075B633 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8n-2A0A075B633 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8n-2A0A075B633 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8n-2A0A075B633 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8n-2A0A075B633 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8n-2A0A075B633 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8n-2A0A075B633 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8n-2A0A075B633 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8n-2A0A075B633 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.86□□□□□ -0.03
Trav8n-2A0A075B633 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav8n-2A0A075B633 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8n-2A0A075B633 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8n-2A0A075B633 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav8n-2A0A075B633 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8n-2A0A075B633 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav8n-2A0A075B633 Gm14822-201ENSMUST00000122247 291 ntBASIC14.84□□□□□ -0.03
Trav8n-2A0A075B633 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav8n-2A0A075B633 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.84□□□□□ -0.03
Trav8n-2A0A075B633 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.84□□□□□ -0.03
Trav8n-2A0A075B633 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8n-2A0A075B633 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8n-2A0A075B633 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8n-2A0A075B633 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8n-2A0A075B633 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8n-2A0A075B633 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav8n-2A0A075B633 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8n-2A0A075B633 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav8n-2A0A075B633 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Trav8n-2A0A075B633 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav8n-2A0A075B633 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Gm23935-201ENSMUST00000102303 57 ntBASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Gm24270-201ENSMUST00000102326 57 ntBASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Gm24245-201ENSMUST00000157318 57 ntBASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms