Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Gm5408-201ENSMUST00000197998 747 ntBASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 AC099934.2-201ENSMUST00000196389 70 ntBASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 AC156953.1-201ENSMUST00000196953 70 ntBASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 AC157822.2-201ENSMUST00000200291 70 ntBASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Gm2011-201ENSMUST00000203124 1263 ntBASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Asic1-205ENSMUST00000228185 1818 ntBASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16d-dv11A0A075B617 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav16d-dv11A0A075B617 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav16d-dv11A0A075B617 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16d-dv11A0A075B617 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16d-dv11A0A075B617 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16d-dv11A0A075B617 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16d-dv11A0A075B617 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16d-dv11A0A075B617 Gm10138-203ENSMUST00000206952 366 ntBASIC11.98□□□□□ -0.49
Trav16d-dv11A0A075B617 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16d-dv11A0A075B617 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav16d-dv11A0A075B617 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16d-dv11A0A075B617 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav16d-dv11A0A075B617 Mtag2-201ENSMUST00000058665 714 ntBASIC11.98□□□□□ -0.49
Trav16d-dv11A0A075B617 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16d-dv11A0A075B617 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trav16d-dv11A0A075B617 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16d-dv11A0A075B617 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16d-dv11A0A075B617 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Trav16d-dv11A0A075B617 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16d-dv11A0A075B617 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16d-dv11A0A075B617 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16d-dv11A0A075B617 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16d-dv11A0A075B617 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms