Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav1A0A075B5Z4 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav1A0A075B5Z4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav1A0A075B5Z4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav1A0A075B5Z4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav1A0A075B5Z4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav1A0A075B5Z4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav1A0A075B5Z4 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav1A0A075B5Z4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav1A0A075B5Z4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav1A0A075B5Z4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav1A0A075B5Z4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav1A0A075B5Z4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Trav1A0A075B5Z4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav1A0A075B5Z4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav1A0A075B5Z4 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.1■□□□□ 0.01
Trav1A0A075B5Z4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav1A0A075B5Z4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
Trav1A0A075B5Z4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav1A0A075B5Z4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav1A0A075B5Z4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Gm11355-201ENSMUST00000121120 306 ntBASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Gm10252-201ENSMUST00000209541 832 ntBASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Gm18101-201ENSMUST00000215769 548 ntBASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav1A0A075B5Z4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav1A0A075B5Z4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav1A0A075B5Z4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav1A0A075B5Z4 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav1A0A075B5Z4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav1A0A075B5Z4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Trav1A0A075B5Z4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav1A0A075B5Z4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav1A0A075B5Z4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Trav1A0A075B5Z4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav1A0A075B5Z4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav1A0A075B5Z4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav1A0A075B5Z4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav1A0A075B5Z4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav1A0A075B5Z4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.08■□□□□ 0
Trav1A0A075B5Z4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav1A0A075B5Z4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.08■□□□□ 0
Trav1A0A075B5Z4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav1A0A075B5Z4 Gm18032-201ENSMUST00000222541 538 ntBASIC15.08■□□□□ 0
Trav1A0A075B5Z4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav1A0A075B5Z4 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.08■□□□□ 0
Trav1A0A075B5Z4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav1A0A075B5Z4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav1A0A075B5Z4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav1A0A075B5Z4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav1A0A075B5Z4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.08■□□□□ 0
Trav1A0A075B5Z4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav1A0A075B5Z4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav1A0A075B5Z4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav1A0A075B5Z4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trav1A0A075B5Z4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav1A0A075B5Z4 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.08■□□□□ 0
Trav1A0A075B5Z4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav1A0A075B5Z4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav1A0A075B5Z4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav1A0A075B5Z4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav1A0A075B5Z4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav1A0A075B5Z4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav1A0A075B5Z4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.07■□□□□ 0
Trav1A0A075B5Z4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav1A0A075B5Z4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav1A0A075B5Z4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav1A0A075B5Z4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.07■□□□□ 0
Trav1A0A075B5Z4 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Trav1A0A075B5Z4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms