Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 RNU2-50P-201ENST00000410494 143 ntBASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 MRPL53P1-201ENST00000414323 319 ntBASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 AL450023.1-201ENST00000450868 751 ntBASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 RPL23AP24-201ENST00000458203 385 ntBASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 AC007686.1-201ENST00000488511 463 ntBASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 AC022616.8-201ENST00000533569 253 ntBASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 AL049872.1-201ENST00000556323 322 ntBASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 AL365440.1-201ENST00000436135 2167 ntBASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 RNA5SP132-201ENST00000364725 118 ntBASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 MIR105-2-201ENST00000385083 81 ntBASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 MIR34A-201ENST00000385130 110 ntBASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 RNA5SP91-201ENST00000390902 119 ntBASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 BMS1P17-202ENST00000416720 316 ntBASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 BX510359.3-201ENST00000422168 306 ntBASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 RPS27AP12-201ENST00000429552 465 ntBASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 AL357134.1-201ENST00000445848 426 ntBASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 RPS26P39-201ENST00000469206 341 ntBASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 RAC1P5-201ENST00000512182 576 ntBASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 AC107027.2-201ENST00000512197 115 ntBASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 RNU6-966P-201ENST00000516479 104 ntBASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 AP005403.1-201ENST00000579720 229 ntBASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 AC002545.1-201ENST00000592511 181 ntBASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
PCDHB3Q9Y5E6 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 MFSD8-239ENST00000641590 2479 ntBASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 AC009812.4-201ENST00000569134 1805 ntBASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 AL121839.2-201ENST00000565058 6943 ntBASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 HLFP1-201ENST00000402375 499 ntBASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 CTSL3P-202ENST00000412179 788 ntBASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 AL355433.1-201ENST00000422804 300 ntBASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 AC008065.1-201ENST00000428525 348 ntBASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 RPS12P17-201ENST00000438591 377 ntBASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 Z82210.1-201ENST00000440037 231 ntBASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 AC023141.8-201ENST00000442554 208 ntBASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 RPS20P10-201ENST00000451209 253 ntBASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 DUTP1-201ENST00000493631 470 ntBASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 SNORA43.3-201ENST00000517240 103 ntBASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 AC115990.1-201ENST00000526957 301 ntBASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 UBL5P4-201ENST00000562584 236 ntBASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 OR7E18P-201ENST00000592589 702 ntBASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 AC007390.2-201ENST00000606229 3803 ntBASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 AC011603.4-201ENST00000611325 277 ntBASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 AC116096.1-201ENST00000566804 2314 ntBASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB3Q9Y5E6 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 RNU6-199P-201ENST00000362954 107 ntBASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 Y_RNA.172-201ENST00000363765 102 ntBASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 SNORA74A-201ENST00000364089 198 ntBASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 RNU1-136P-201ENST00000384181 164 ntBASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 SNORA5.1-201ENST00000384275 131 ntBASIC5.53□□□□□ -1.52
PCDHB3Q9Y5E6 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms