Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
PHRF1Q9P1Y6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.57□□□□□ -2.16
PHRF1Q9P1Y6 AC009127.3-201ENST00000570531 403 ntBASIC1.57□□□□□ -2.16
PHRF1Q9P1Y6 RPS15AP11-201ENST00000594193 385 ntBASIC1.57□□□□□ -2.16
PHRF1Q9P1Y6 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.57□□□□□ -2.16
PHRF1Q9P1Y6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.57□□□□□ -2.16
PHRF1Q9P1Y6 DPRXP5-201ENST00000604662 539 ntBASIC1.57□□□□□ -2.16
PHRF1Q9P1Y6 AC025048.6-202ENST00000627667 438 ntBASIC1.57□□□□□ -2.16
PHRF1Q9P1Y6 RNU4-23P-201ENST00000362839 140 ntBASIC1.56□□□□□ -2.16
PHRF1Q9P1Y6 AC092745.2-202ENST00000411880 369 ntBASIC1.56□□□□□ -2.16
PHRF1Q9P1Y6 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.56□□□□□ -2.16
PHRF1Q9P1Y6 AC108157.1-201ENST00000510511 539 ntBASIC1.56□□□□□ -2.16
PHRF1Q9P1Y6 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.56□□□□□ -2.16
PHRF1Q9P1Y6 OR10V3P-201ENST00000525712 725 ntBASIC1.56□□□□□ -2.16
PHRF1Q9P1Y6 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.56□□□□□ -2.16
PHRF1Q9P1Y6 AL121821.2-201ENST00000556081 394 ntBASIC1.56□□□□□ -2.16
PHRF1Q9P1Y6 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.56□□□□□ -2.16
PHRF1Q9P1Y6 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.56□□□□□ -2.16
PHRF1Q9P1Y6 RN7SL793P-201ENST00000583259 296 ntBASIC1.56□□□□□ -2.16
PHRF1Q9P1Y6 AL390862.1-201ENST00000635467 1469 ntBASIC1.56□□□□□ -2.16
PHRF1Q9P1Y6 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
PHRF1Q9P1Y6 RNA5SP139-201ENST00000364340 117 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 RNU1-133P-201ENST00000364867 167 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 HMGN1P14-201ENST00000412459 517 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 AC234781.2-201ENST00000426370 994 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 snoU13.4-201ENST00000458916 104 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 SETP11-201ENST00000473027 690 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 ERHP1-201ENST00000523006 310 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 AC118942.1-201ENST00000529674 1035 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 AC024619.4-201ENST00000580924 316 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 AC011374.2-201ENST00000607135 526 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 MIR7974-201ENST00000615835 79 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 AC024595.1-201ENST00000623088 387 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 SNORA51.12-201ENST00000384448 134 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 RNU1-148P-201ENST00000384472 162 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 RNU2-32P-201ENST00000411193 191 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 AL606495.1-201ENST00000422100 813 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 AC233728.2-201ENST00000425348 757 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 SNRPFP3-201ENST00000457792 225 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 KLRA1P-201ENST00000503499 986 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 RNU6-405P-201ENST00000516637 110 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 RNU6-467P-201ENST00000517027 110 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 SNORA31.20-201ENST00000517111 133 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 CIR1P1-201ENST00000524055 1133 ntBASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
PHRF1Q9P1Y6 MFSD8-213ENST00000641134 1327 ntBASIC1.54□□□□□ -2.16
PHRF1Q9P1Y6 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
PHRF1Q9P1Y6 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
PHRF1Q9P1Y6 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
PHRF1Q9P1Y6 SNORA18.2-201ENST00000383865 132 ntBASIC1.54□□□□□ -2.16
PHRF1Q9P1Y6 AC096533.1-201ENST00000411645 353 ntBASIC1.54□□□□□ -2.16
PHRF1Q9P1Y6 AC099677.1-201ENST00000420575 175 ntBASIC1.54□□□□□ -2.16
PHRF1Q9P1Y6 AC096632.1-201ENST00000427395 310 ntBASIC1.54□□□□□ -2.16
PHRF1Q9P1Y6 YWHAZP8-201ENST00000436935 731 ntBASIC1.54□□□□□ -2.16
PHRF1Q9P1Y6 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.54□□□□□ -2.16
PHRF1Q9P1Y6 AL360221.1-201ENST00000445989 335 ntBASIC1.54□□□□□ -2.16
PHRF1Q9P1Y6 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.54□□□□□ -2.16
PHRF1Q9P1Y6 RFC5P1-201ENST00000454419 874 ntBASIC1.54□□□□□ -2.16
PHRF1Q9P1Y6 AC083923.1-201ENST00000523708 376 ntBASIC1.54□□□□□ -2.16
PHRF1Q9P1Y6 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
PHRF1Q9P1Y6 AC092470.1-201ENST00000546187 132 ntBASIC1.54□□□□□ -2.16
PHRF1Q9P1Y6 AC025918.2-201ENST00000558683 763 ntBASIC1.54□□□□□ -2.16
PHRF1Q9P1Y6 AC018618.2-201ENST00000604770 446 ntBASIC1.54□□□□□ -2.16
PHRF1Q9P1Y6 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
PHRF1Q9P1Y6 SGO1P2-201ENST00000429458 1589 ntBASIC1.53□□□□□ -2.16
PHRF1Q9P1Y6 SNORA1.3-201ENST00000384676 136 ntBASIC1.53□□□□□ -2.16
PHRF1Q9P1Y6 RNU6-882P-201ENST00000391025 103 ntBASIC1.53□□□□□ -2.16
PHRF1Q9P1Y6 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.53□□□□□ -2.16
PHRF1Q9P1Y6 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.53□□□□□ -2.16
PHRF1Q9P1Y6 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.53□□□□□ -2.16
PHRF1Q9P1Y6 RAD1P2-201ENST00000446414 663 ntBASIC1.53□□□□□ -2.16
PHRF1Q9P1Y6 AC108059.3-201ENST00000456388 214 ntBASIC1.53□□□□□ -2.16
PHRF1Q9P1Y6 AC010285.1-201ENST00000470580 392 ntBASIC1.53□□□□□ -2.16
PHRF1Q9P1Y6 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.53□□□□□ -2.16
PHRF1Q9P1Y6 CASP1P1-201ENST00000526345 212 ntBASIC1.53□□□□□ -2.16
PHRF1Q9P1Y6 CYCSP26-201ENST00000534107 320 ntBASIC1.53□□□□□ -2.16
PHRF1Q9P1Y6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.53□□□□□ -2.16
PHRF1Q9P1Y6 AC087481.2-201ENST00000565492 330 ntBASIC1.53□□□□□ -2.16
PHRF1Q9P1Y6 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.53□□□□□ -2.16
PHRF1Q9P1Y6 AC023825.1-201ENST00000566704 1030 ntBASIC1.53□□□□□ -2.16
PHRF1Q9P1Y6 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC1.53□□□□□ -2.16
PHRF1Q9P1Y6 XIAPP1-201ENST00000603162 600 ntBASIC1.53□□□□□ -2.16
PHRF1Q9P1Y6 AC011330.2-201ENST00000621680 635 ntBASIC1.53□□□□□ -2.16
PHRF1Q9P1Y6 MTND4P8-201ENST00000514997 1362 ntBASIC1.53□□□□□ -2.16
PHRF1Q9P1Y6 Z86062.1-201ENST00000406773 777 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms