Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 RNU6-156P-201ENST00000621869 107 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 MIR6500-201ENST00000622700 86 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 AL078596.1-201ENST00000624856 447 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 MAPK10-362ENST00000641864 4484 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
USP43Q70EL4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.34□□□□□ -1.88
USP43Q70EL4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.34□□□□□ -1.88
USP43Q70EL4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
USP43Q70EL4 AP001350.1-201ENST00000601906 1524 ntBASIC3.34□□□□□ -1.88
USP43Q70EL4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
USP43Q70EL4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
USP43Q70EL4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.33□□□□□ -1.88
USP43Q70EL4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
USP43Q70EL4 MIR30E-201ENST00000362104 92 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 MIR369-201ENST00000362155 70 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 Y_RNA.157-201ENST00000363638 102 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 RNU6-525P-201ENST00000363685 104 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 RNA5SP387-201ENST00000364226 106 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 SNORA73.2-201ENST00000364946 201 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 RNU6-196P-201ENST00000384315 107 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 RNU2-39P-201ENST00000410604 198 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 RNU2-47P-201ENST00000410649 186 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.33□□□□□ -1.88
USP43Q70EL4 AC245054.2-201ENST00000415639 319 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 AC113618.1-201ENST00000416747 285 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.33□□□□□ -1.88
USP43Q70EL4 RPL23AP83-201ENST00000434984 473 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 RPL7P54-201ENST00000438336 674 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 GTF2IP13-201ENST00000438487 386 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 AC009969.1-201ENST00000438726 172 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 CBWD4P-201ENST00000445695 655 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 RPS3AP46-201ENST00000448352 682 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 AC125238.1-201ENST00000448842 249 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.33□□□□□ -1.88
USP43Q70EL4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.33□□□□□ -1.88
USP43Q70EL4 MTCO3P2-201ENST00000457365 171 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 RPS4XP2-201ENST00000458402 793 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 Y_RNA.631-201ENST00000459607 101 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 RN7SL283P-201ENST00000489055 303 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 AL139099.1-201ENST00000497398 403 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.33□□□□□ -1.88
USP43Q70EL4 RAC1P2-201ENST00000511164 579 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.33□□□□□ -1.88
USP43Q70EL4 AC017037.2-201ENST00000513850 890 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 RN7SKP96-201ENST00000516948 297 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 RN7SKP234-201ENST00000517173 224 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.33□□□□□ -1.88
USP43Q70EL4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.33□□□□□ -1.88
USP43Q70EL4 AC107953.1-201ENST00000522216 297 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.33□□□□□ -1.88
USP43Q70EL4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.33□□□□□ -1.88
USP43Q70EL4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.33□□□□□ -1.88
USP43Q70EL4 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.33□□□□□ -1.88
USP43Q70EL4 AL109918.3-201ENST00000603072 338 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 7SK.7-201ENST00000603504 247 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 AC004853.1-201ENST00000604902 698 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 MIR6868-201ENST00000611215 58 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.33□□□□□ -1.88
USP43Q70EL4 AC090971.5-201ENST00000621102 293 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 AC244100.1-202ENST00000621554 382 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 RMST_7.1-201ENST00000621935 268 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 AL354798.1-201ENST00000622505 329 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 AC040168.1-201ENST00000623594 991 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.33□□□□□ -1.88
USP43Q70EL4 AC012442.3-202ENST00000636742 206 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 U6.101-201ENST00000637707 76 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
USP43Q70EL4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
USP43Q70EL4 AC118273.1-201ENST00000525324 3006 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.33□□□□□ -1.88
USP43Q70EL4 MTND4P1-201ENST00000457501 1466 ntBASIC3.33□□□□□ -1.88
USP43Q70EL4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.33□□□□□ -1.88
USP43Q70EL4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.33□□□□□ -1.88
USP43Q70EL4 AC093908.1-201ENST00000623125 8092 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
USP43Q70EL4 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
USP43Q70EL4 Y_RNA.193-201ENST00000363979 102 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 RNU6-1322P-201ENST00000364309 107 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 Y_RNA.315-201ENST00000365117 102 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 Y_RNA.333-201ENST00000365274 102 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 Y_RNA.381-201ENST00000365666 102 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 Y_RNA.401-201ENST00000383965 117 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 RNU6-505P-201ENST00000384427 107 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 SNORA70E-201ENST00000384492 135 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
USP43Q70EL4 RPL23AP32-201ENST00000395315 459 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 ARF4P3-201ENST00000397387 509 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 HSPE1P26-201ENST00000405341 275 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.32□□□□□ -1.88
USP43Q70EL4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.32□□□□□ -1.88
USP43Q70EL4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.32□□□□□ -1.88
USP43Q70EL4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.32□□□□□ -1.88
USP43Q70EL4 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.32□□□□□ -1.88
USP43Q70EL4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.32□□□□□ -1.88
USP43Q70EL4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.32□□□□□ -1.88
USP43Q70EL4 RPS11P1-201ENST00000451072 473 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 MTND5P22-201ENST00000458380 195 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms