Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AP000797.1-201ENST00000478870 387 ntBASIC2.94□□□□□ -1.94
CASC4Q6P4E1 RPF2P2-201ENST00000504693 896 ntBASIC2.94□□□□□ -1.94
CASC4Q6P4E1 AC010486.2-201ENST00000505572 483 ntBASIC2.94□□□□□ -1.94
CASC4Q6P4E1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.94□□□□□ -1.94
CASC4Q6P4E1 RNA5SP290-201ENST00000517133 127 ntBASIC2.94□□□□□ -1.94
CASC4Q6P4E1 AC106038.2-201ENST00000520706 568 ntBASIC2.94□□□□□ -1.94
CASC4Q6P4E1 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.94□□□□□ -1.94
CASC4Q6P4E1 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.94□□□□□ -1.94
CASC4Q6P4E1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.94□□□□□ -1.94
CASC4Q6P4E1 AC107016.2-201ENST00000547968 190 ntBASIC2.94□□□□□ -1.94
CASC4Q6P4E1 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.94□□□□□ -1.94
CASC4Q6P4E1 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.94□□□□□ -1.94
CASC4Q6P4E1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.94□□□□□ -1.94
CASC4Q6P4E1 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.94□□□□□ -1.94
CASC4Q6P4E1 AL391261.3-201ENST00000557194 520 ntBASIC2.94□□□□□ -1.94
CASC4Q6P4E1 ROCK1P1-201ENST00000573767 549 ntBASIC2.94□□□□□ -1.94
CASC4Q6P4E1 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.94□□□□□ -1.94
CASC4Q6P4E1 MIR3118-1-201ENST00000581787 76 ntBASIC2.94□□□□□ -1.94
CASC4Q6P4E1 MIR5195-201ENST00000583555 115 ntBASIC2.94□□□□□ -1.94
CASC4Q6P4E1 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CASC4Q6P4E1 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.94□□□□□ -1.94
CASC4Q6P4E1 AC012119.1-201ENST00000603184 222 ntBASIC2.94□□□□□ -1.94
CASC4Q6P4E1 AC008277.2-201ENST00000605196 797 ntBASIC2.94□□□□□ -1.94
CASC4Q6P4E1 AP000860.1-201ENST00000605250 559 ntBASIC2.94□□□□□ -1.94
CASC4Q6P4E1 AL136363.1-201ENST00000605349 337 ntBASIC2.94□□□□□ -1.94
CASC4Q6P4E1 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.94□□□□□ -1.94
CASC4Q6P4E1 AC239868.4-201ENST00000608318 671 ntBASIC2.94□□□□□ -1.94
CASC4Q6P4E1 FTX_3.1-201ENST00000610451 147 ntBASIC2.94□□□□□ -1.94
CASC4Q6P4E1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.94□□□□□ -1.94
CASC4Q6P4E1 Z99129.2-201ENST00000619967 314 ntBASIC2.94□□□□□ -1.94
CASC4Q6P4E1 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.94□□□□□ -1.94
CASC4Q6P4E1 AC002064.3-201ENST00000623448 346 ntBASIC2.94□□□□□ -1.94
CASC4Q6P4E1 AC091953.2-201ENST00000623979 160 ntBASIC2.94□□□□□ -1.94
CASC4Q6P4E1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CASC4Q6P4E1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CASC4Q6P4E1 AC092104.1-201ENST00000497346 1441 ntBASIC2.93□□□□□ -1.94
CASC4Q6P4E1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CASC4Q6P4E1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CASC4Q6P4E1 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CASC4Q6P4E1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.93□□□□□ -1.94
CASC4Q6P4E1 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CASC4Q6P4E1 RNU5F-7P-201ENST00000363696 115 ntBASIC2.93□□□□□ -1.94
CASC4Q6P4E1 Y_RNA.169-201ENST00000363745 96 ntBASIC2.93□□□□□ -1.94
CASC4Q6P4E1 MIR512-1-201ENST00000384913 84 ntBASIC2.93□□□□□ -1.94
CASC4Q6P4E1 AC093151.1-201ENST00000427711 313 ntBASIC2.93□□□□□ -1.94
CASC4Q6P4E1 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.93□□□□□ -1.94
CASC4Q6P4E1 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.93□□□□□ -1.94
CASC4Q6P4E1 COX6CP2-201ENST00000444980 225 ntBASIC2.93□□□□□ -1.94
CASC4Q6P4E1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.93□□□□□ -1.94
CASC4Q6P4E1 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.93□□□□□ -1.94
CASC4Q6P4E1 RNU7-23P-201ENST00000459465 62 ntBASIC2.93□□□□□ -1.94
CASC4Q6P4E1 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
CASC4Q6P4E1 AC109486.1-201ENST00000486833 374 ntBASIC2.93□□□□□ -1.94
CASC4Q6P4E1 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.93□□□□□ -1.94
CASC4Q6P4E1 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.93□□□□□ -1.94
CASC4Q6P4E1 RNA5SP471-201ENST00000516971 106 ntBASIC2.93□□□□□ -1.94
CASC4Q6P4E1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CASC4Q6P4E1 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.93□□□□□ -1.94
CASC4Q6P4E1 ARL2BPP2-201ENST00000550907 489 ntBASIC2.93□□□□□ -1.94
CASC4Q6P4E1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.93□□□□□ -1.94
CASC4Q6P4E1 AC109446.2-201ENST00000567872 497 ntBASIC2.93□□□□□ -1.94
CASC4Q6P4E1 AC121334.2-201ENST00000605387 271 ntBASIC2.93□□□□□ -1.94
CASC4Q6P4E1 AC092354.1-201ENST00000606057 376 ntBASIC2.93□□□□□ -1.94
CASC4Q6P4E1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.93□□□□□ -1.94
CASC4Q6P4E1 AC092140.2-201ENST00000618027 521 ntBASIC2.93□□□□□ -1.94
CASC4Q6P4E1 AL603755.1-201ENST00000619504 163 ntBASIC2.93□□□□□ -1.94
CASC4Q6P4E1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.93□□□□□ -1.94
CASC4Q6P4E1 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.93□□□□□ -1.94
CASC4Q6P4E1 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.93□□□□□ -1.94
CASC4Q6P4E1 RNU6-1167P-201ENST00000363227 94 ntBASIC2.92□□□□□ -1.94
CASC4Q6P4E1 RNU5E-5P-201ENST00000365379 116 ntBASIC2.92□□□□□ -1.94
CASC4Q6P4E1 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CASC4Q6P4E1 Y_RNA.608-201ENST00000410647 95 ntBASIC2.92□□□□□ -1.94
CASC4Q6P4E1 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.92□□□□□ -1.94
CASC4Q6P4E1 HMGN2P30-201ENST00000423237 256 ntBASIC2.92□□□□□ -1.94
CASC4Q6P4E1 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.92□□□□□ -1.94
CASC4Q6P4E1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.92□□□□□ -1.94
CASC4Q6P4E1 AC006946.1-201ENST00000429106 328 ntBASIC2.92□□□□□ -1.94
CASC4Q6P4E1 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.92□□□□□ -1.94
CASC4Q6P4E1 MTND1P30-201ENST00000441241 901 ntBASIC2.92□□□□□ -1.94
CASC4Q6P4E1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.92□□□□□ -1.94
CASC4Q6P4E1 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.92□□□□□ -1.94
CASC4Q6P4E1 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.92□□□□□ -1.94
CASC4Q6P4E1 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.92□□□□□ -1.94
CASC4Q6P4E1 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.92□□□□□ -1.94
CASC4Q6P4E1 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.92□□□□□ -1.94
CASC4Q6P4E1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.92□□□□□ -1.94
CASC4Q6P4E1 SCGB1D5P-201ENST00000515134 247 ntBASIC2.92□□□□□ -1.94
CASC4Q6P4E1 SNORA31.3-201ENST00000516029 96 ntBASIC2.92□□□□□ -1.94
CASC4Q6P4E1 AP006587.4-201ENST00000526053 529 ntBASIC2.92□□□□□ -1.94
CASC4Q6P4E1 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CASC4Q6P4E1 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.92□□□□□ -1.94
CASC4Q6P4E1 HSPE1P20-201ENST00000538133 289 ntBASIC2.92□□□□□ -1.94
CASC4Q6P4E1 MIR3915-201ENST00000578518 97 ntBASIC2.92□□□□□ -1.94
CASC4Q6P4E1 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.92□□□□□ -1.94
CASC4Q6P4E1 AC098826.3-201ENST00000603823 466 ntBASIC2.92□□□□□ -1.94
CASC4Q6P4E1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.92□□□□□ -1.94
CASC4Q6P4E1 AC006338.1-201ENST00000618453 749 ntBASIC2.92□□□□□ -1.94
CASC4Q6P4E1 AC010338.1-201ENST00000621823 717 ntBASIC2.92□□□□□ -1.94
CASC4Q6P4E1 AC091953.5-201ENST00000622919 233 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms