Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.82□□□□□ -2.28
TFF3Q07654 AC093716.1-201ENST00000435923 377 ntBASIC0.82□□□□□ -2.28
TFF3Q07654 MTND2P29-201ENST00000438595 412 ntBASIC0.82□□□□□ -2.28
TFF3Q07654 RPL12P25-201ENST00000455592 494 ntBASIC0.82□□□□□ -2.28
TFF3Q07654 AL031183.1-201ENST00000457667 207 ntBASIC0.82□□□□□ -2.28
TFF3Q07654 AC023824.2-201ENST00000566185 400 ntBASIC0.82□□□□□ -2.28
TFF3Q07654 AC012254.4-201ENST00000588843 273 ntBASIC0.82□□□□□ -2.28
TFF3Q07654 AC005034.5-201ENST00000604219 466 ntBASIC0.82□□□□□ -2.28
TFF3Q07654 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
TFF3Q07654 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
TFF3Q07654 AC121333.1-201ENST00000567488 2709 ntBASIC0.81□□□□□ -2.28
TFF3Q07654 CCT4P2-201ENST00000233836 1548 ntBASIC0.81□□□□□ -2.28
TFF3Q07654 RNU6-1105P-201ENST00000384774 107 ntBASIC0.81□□□□□ -2.28
TFF3Q07654 AL356131.1-201ENST00000405826 414 ntBASIC0.81□□□□□ -2.28
TFF3Q07654 ARL2BPP3-201ENST00000421226 480 ntBASIC0.81□□□□□ -2.28
TFF3Q07654 AL445305.1-201ENST00000432577 575 ntBASIC0.81□□□□□ -2.28
TFF3Q07654 AL591212.2-201ENST00000433923 257 ntBASIC0.81□□□□□ -2.28
TFF3Q07654 LTV1P1-201ENST00000510683 1237 ntBASIC0.81□□□□□ -2.28
TFF3Q07654 GLYCAM1-201ENST00000546596 285 ntBASIC0.81□□□□□ -2.28
TFF3Q07654 AC074029.2-201ENST00000551045 634 ntBASIC0.81□□□□□ -2.28
TFF3Q07654 CENPUP2-201ENST00000555897 1186 ntBASIC0.81□□□□□ -2.28
TFF3Q07654 AL391646.1-201ENST00000603860 190 ntBASIC0.81□□□□□ -2.28
TFF3Q07654 AL136363.1-201ENST00000605349 337 ntBASIC0.81□□□□□ -2.28
TFF3Q07654 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.81□□□□□ -2.28
TFF3Q07654 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC0.81□□□□□ -2.28
TFF3Q07654 AC008555.8-201ENST00000623602 2168 ntBASIC0.81□□□□□ -2.28
TFF3Q07654 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TFF3Q07654 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
TFF3Q07654 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
TFF3Q07654 MIR147B-201ENST00000390185 80 ntBASIC0.8□□□□□ -2.28
TFF3Q07654 RNU11-5P-201ENST00000391216 129 ntBASIC0.8□□□□□ -2.28
TFF3Q07654 AL512604.1-201ENST00000404812 257 ntBASIC0.8□□□□□ -2.28
TFF3Q07654 RNU6-920P-201ENST00000410926 92 ntBASIC0.8□□□□□ -2.28
TFF3Q07654 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC0.8□□□□□ -2.28
TFF3Q07654 AC008850.1-201ENST00000427546 362 ntBASIC0.8□□□□□ -2.28
TFF3Q07654 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.8□□□□□ -2.28
TFF3Q07654 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.8□□□□□ -2.28
TFF3Q07654 AC007395.1-201ENST00000451333 677 ntBASIC0.8□□□□□ -2.28
TFF3Q07654 ANKRD26P4-201ENST00000455755 950 ntBASIC0.8□□□□□ -2.28
TFF3Q07654 TPRKBP1-201ENST00000456243 481 ntBASIC0.8□□□□□ -2.28
TFF3Q07654 snoU109.1-201ENST00000459339 135 ntBASIC0.8□□□□□ -2.28
TFF3Q07654 RPL37P6-202ENST00000464216 403 ntBASIC0.8□□□□□ -2.28
TFF3Q07654 AC117503.1-201ENST00000472241 394 ntBASIC0.8□□□□□ -2.28
TFF3Q07654 AC010301.1-201ENST00000473936 355 ntBASIC0.8□□□□□ -2.28
TFF3Q07654 OR9N1P-202ENST00000494289 481 ntBASIC0.8□□□□□ -2.28
TFF3Q07654 MRPS33P3-201ENST00000513456 322 ntBASIC0.8□□□□□ -2.28
TFF3Q07654 RNU2-19P-201ENST00000517288 84 ntBASIC0.8□□□□□ -2.28
TFF3Q07654 AC023825.1-201ENST00000566704 1030 ntBASIC0.8□□□□□ -2.28
TFF3Q07654 AC233266.2-201ENST00000567067 528 ntBASIC0.8□□□□□ -2.28
TFF3Q07654 AC005730.3-201ENST00000583067 366 ntBASIC0.8□□□□□ -2.28
TFF3Q07654 AC078899.2-201ENST00000595282 212 ntBASIC0.8□□□□□ -2.28
TFF3Q07654 BNIP3P7-201ENST00000605641 516 ntBASIC0.8□□□□□ -2.28
TFF3Q07654 AC025594.3-201ENST00000613068 790 ntBASIC0.8□□□□□ -2.28
TFF3Q07654 AL161423.1-201ENST00000613700 262 ntBASIC0.8□□□□□ -2.28
TFF3Q07654 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TFF3Q07654 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TFF3Q07654 AC018630.2-201ENST00000534866 2403 ntBASIC0.79□□□□□ -2.28
TFF3Q07654 AC131280.1-202ENST00000624067 4211 ntBASIC0.79□□□□□ -2.28
TFF3Q07654 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.79□□□□□ -2.28
TFF3Q07654 TRGV6-201ENST00000417928 299 ntBASIC0.79□□□□□ -2.28
TFF3Q07654 RPL30P4-201ENST00000429309 333 ntBASIC0.79□□□□□ -2.28
TFF3Q07654 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC0.79□□□□□ -2.28
TFF3Q07654 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.79□□□□□ -2.28
TFF3Q07654 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
TFF3Q07654 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.79□□□□□ -2.28
TFF3Q07654 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.79□□□□□ -2.28
TFF3Q07654 RNU6-405P-201ENST00000516637 110 ntBASIC0.79□□□□□ -2.28
TFF3Q07654 RNU6-467P-201ENST00000517027 110 ntBASIC0.79□□□□□ -2.28
TFF3Q07654 AP005639.2-201ENST00000527592 928 ntBASIC0.79□□□□□ -2.28
TFF3Q07654 CBX3P8-201ENST00000532412 525 ntBASIC0.79□□□□□ -2.28
TFF3Q07654 MGST1-215ENST00000540056 546 ntTSL 3 BASIC0.79□□□□□ -2.28
TFF3Q07654 IMMP1LP2-201ENST00000552954 492 ntBASIC0.79□□□□□ -2.28
TFF3Q07654 AL121821.2-201ENST00000556081 394 ntBASIC0.79□□□□□ -2.28
TFF3Q07654 MIR4287-201ENST00000579398 78 ntBASIC0.79□□□□□ -2.28
TFF3Q07654 RN7SL793P-201ENST00000583259 296 ntBASIC0.79□□□□□ -2.28
TFF3Q07654 MIR98-201ENST00000606724 119 ntBASIC0.79□□□□□ -2.28
TFF3Q07654 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
TFF3Q07654 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.79□□□□□ -2.28
TFF3Q07654 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.79□□□□□ -2.28
TFF3Q07654 Y_RNA.205-201ENST00000364128 113 ntBASIC0.78□□□□□ -2.28
TFF3Q07654 RNA5SP252-201ENST00000391131 119 ntBASIC0.78□□□□□ -2.28
TFF3Q07654 Z86062.1-201ENST00000406773 777 ntBASIC0.78□□□□□ -2.28
TFF3Q07654 TPMTP3-201ENST00000411928 735 ntBASIC0.78□□□□□ -2.28
TFF3Q07654 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.78□□□□□ -2.28
TFF3Q07654 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
TFF3Q07654 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.78□□□□□ -2.28
TFF3Q07654 AC004022.1-201ENST00000447766 1066 ntBASIC0.78□□□□□ -2.28
TFF3Q07654 RNU6-1132P-201ENST00000459214 107 ntBASIC0.78□□□□□ -2.28
TFF3Q07654 MTATP6P22-201ENST00000507369 598 ntBASIC0.78□□□□□ -2.28
TFF3Q07654 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.78□□□□□ -2.28
TFF3Q07654 MIR4698-201ENST00000577795 80 ntBASIC0.78□□□□□ -2.28
TFF3Q07654 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.78□□□□□ -2.28
TFF3Q07654 MIR3117-201ENST00000584034 78 ntBASIC0.78□□□□□ -2.28
TFF3Q07654 PRR13P7-201ENST00000605538 430 ntBASIC0.78□□□□□ -2.28
TFF3Q07654 AL590282.1-201ENST00000610379 1136 ntBASIC0.78□□□□□ -2.28
TFF3Q07654 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.78□□□□□ -2.28
TFF3Q07654 ZNF29P-201ENST00000225587 168 ntBASIC0.77□□□□□ -2.29
TFF3Q07654 AC234781.2-201ENST00000426370 994 ntBASIC0.77□□□□□ -2.29
TFF3Q07654 AC004941.2-201ENST00000427009 228 ntBASIC0.77□□□□□ -2.29
TFF3Q07654 CBX3P6-201ENST00000430257 527 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms