Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.41□□□□□ -1.86
SOX2P48431 AL118558.2-201ENST00000556294 238 ntBASIC3.41□□□□□ -1.86
SOX2P48431 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.41□□□□□ -1.86
SOX2P48431 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.41□□□□□ -1.86
SOX2P48431 AC090877.1-201ENST00000561418 344 ntBASIC3.41□□□□□ -1.86
SOX2P48431 AC005668.1-201ENST00000571142 476 ntBASIC3.41□□□□□ -1.86
SOX2P48431 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.41□□□□□ -1.86
SOX2P48431 MIR4719-201ENST00000585233 84 ntBASIC3.41□□□□□ -1.86
SOX2P48431 AC002545.1-201ENST00000592511 181 ntBASIC3.41□□□□□ -1.86
SOX2P48431 AC009233.1-201ENST00000616477 371 ntBASIC3.41□□□□□ -1.86
SOX2P48431 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.41□□□□□ -1.86
SOX2P48431 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.41□□□□□ -1.86
SOX2P48431 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SOX2P48431 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SOX2P48431 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
SOX2P48431 RNA5SP189-201ENST00000364920 115 ntBASIC3.4□□□□□ -1.87
SOX2P48431 RNU6-1127P-201ENST00000384580 107 ntBASIC3.4□□□□□ -1.87
SOX2P48431 Y_RNA.530-201ENST00000384587 101 ntBASIC3.4□□□□□ -1.87
SOX2P48431 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SOX2P48431 ELOCP19-201ENST00000411919 318 ntBASIC3.4□□□□□ -1.87
SOX2P48431 RPS12P24-201ENST00000412619 387 ntBASIC3.4□□□□□ -1.87
SOX2P48431 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.4□□□□□ -1.87
SOX2P48431 AL353678.1-201ENST00000422735 741 ntBASIC3.4□□□□□ -1.87
SOX2P48431 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.4□□□□□ -1.87
SOX2P48431 AL591704.1-201ENST00000432574 275 ntBASIC3.4□□□□□ -1.87
SOX2P48431 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.4□□□□□ -1.87
SOX2P48431 TAAR7P-201ENST00000436141 242 ntBASIC3.4□□□□□ -1.87
SOX2P48431 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.4□□□□□ -1.87
SOX2P48431 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.4□□□□□ -1.87
SOX2P48431 AC083863.1-201ENST00000438811 231 ntBASIC3.4□□□□□ -1.87
SOX2P48431 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.4□□□□□ -1.87
SOX2P48431 AC092001.1-201ENST00000453012 261 ntBASIC3.4□□□□□ -1.87
SOX2P48431 AMD1P1-201ENST00000457220 922 ntBASIC3.4□□□□□ -1.87
SOX2P48431 RPL37P6-201ENST00000460682 294 ntBASIC3.4□□□□□ -1.87
SOX2P48431 SNRPGP3-201ENST00000469405 227 ntBASIC3.4□□□□□ -1.87
SOX2P48431 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.4□□□□□ -1.87
SOX2P48431 AL132838.2-201ENST00000492041 314 ntBASIC3.4□□□□□ -1.87
SOX2P48431 FAM206BP-201ENST00000510179 541 ntBASIC3.4□□□□□ -1.87
SOX2P48431 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.4□□□□□ -1.87
SOX2P48431 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.4□□□□□ -1.87
SOX2P48431 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.4□□□□□ -1.87
SOX2P48431 AC112206.3-201ENST00000514578 389 ntBASIC3.4□□□□□ -1.87
SOX2P48431 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.4□□□□□ -1.87
SOX2P48431 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SOX2P48431 AP004242.1-201ENST00000533701 349 ntBASIC3.4□□□□□ -1.87
SOX2P48431 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.4□□□□□ -1.87
SOX2P48431 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.4□□□□□ -1.87
SOX2P48431 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SOX2P48431 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.4□□□□□ -1.87
SOX2P48431 RPS3AP23-202ENST00000574601 686 ntBASIC3.4□□□□□ -1.87
SOX2P48431 MIR4742-201ENST00000581069 85 ntBASIC3.4□□□□□ -1.87
SOX2P48431 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SOX2P48431 IPO5P1-202ENST00000600039 287 ntBASIC3.4□□□□□ -1.87
SOX2P48431 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.4□□□□□ -1.87
SOX2P48431 AC243960.4-201ENST00000600532 288 ntBASIC3.4□□□□□ -1.87
SOX2P48431 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.4□□□□□ -1.87
SOX2P48431 AC087045.1-201ENST00000605856 382 ntBASIC3.4□□□□□ -1.87
SOX2P48431 AC009570.1-201ENST00000609599 745 ntBASIC3.4□□□□□ -1.87
SOX2P48431 AC034102.8-201ENST00000615146 484 ntBASIC3.4□□□□□ -1.87
SOX2P48431 AC114781.5-201ENST00000615297 108 ntBASIC3.4□□□□□ -1.87
SOX2P48431 AF127577.6-201ENST00000623352 2191 ntBASIC3.4□□□□□ -1.87
SOX2P48431 AC011944.2-201ENST00000624440 683 ntBASIC3.4□□□□□ -1.87
SOX2P48431 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.4□□□□□ -1.87
SOX2P48431 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.4□□□□□ -1.87
SOX2P48431 AC112487.2-201ENST00000637950 304 ntBASIC3.4□□□□□ -1.87
SOX2P48431 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SOX2P48431 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SOX2P48431 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SOX2P48431 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.4□□□□□ -1.87
SOX2P48431 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SOX2P48431 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
SOX2P48431 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.39□□□□□ -1.87
SOX2P48431 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SOX2P48431 RNU4-73P-201ENST00000363164 141 ntBASIC3.39□□□□□ -1.87
SOX2P48431 U3.12-201ENST00000364498 214 ntBASIC3.39□□□□□ -1.87
SOX2P48431 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SOX2P48431 U3.22-201ENST00000391120 215 ntBASIC3.39□□□□□ -1.87
SOX2P48431 MIR937-201ENST00000401271 86 ntBASIC3.39□□□□□ -1.87
SOX2P48431 RNU2-37P-201ENST00000410695 177 ntBASIC3.39□□□□□ -1.87
SOX2P48431 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.39□□□□□ -1.87
SOX2P48431 NDUFB4P5-201ENST00000415445 361 ntBASIC3.39□□□□□ -1.87
SOX2P48431 AC007390.1-201ENST00000415722 356 ntBASIC3.39□□□□□ -1.87
SOX2P48431 AC108032.1-201ENST00000416706 207 ntBASIC3.39□□□□□ -1.87
SOX2P48431 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.39□□□□□ -1.87
SOX2P48431 NCOR1P3-201ENST00000420479 303 ntBASIC3.39□□□□□ -1.87
SOX2P48431 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.39□□□□□ -1.87
SOX2P48431 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.39□□□□□ -1.87
SOX2P48431 AC017083.1-201ENST00000428093 483 ntBASIC3.39□□□□□ -1.87
SOX2P48431 AL356867.1-201ENST00000429623 299 ntBASIC3.39□□□□□ -1.87
SOX2P48431 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.39□□□□□ -1.87
SOX2P48431 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.39□□□□□ -1.87
SOX2P48431 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.39□□□□□ -1.87
SOX2P48431 RPS15AP27-201ENST00000449183 343 ntBASIC3.39□□□□□ -1.87
SOX2P48431 RNU6-329P-201ENST00000459618 107 ntBASIC3.39□□□□□ -1.87
SOX2P48431 UQCRHP4-201ENST00000471686 272 ntBASIC3.39□□□□□ -1.87
SOX2P48431 RPL31P13-201ENST00000484151 370 ntBASIC3.39□□□□□ -1.87
SOX2P48431 MTCO3P9-201ENST00000506989 781 ntBASIC3.39□□□□□ -1.87
SOX2P48431 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
SOX2P48431 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.39□□□□□ -1.87
SOX2P48431 FGF7P4-201ENST00000509595 295 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms