Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 MIR3915-201ENST00000578518 97 ntBASIC3.82□□□□□ -1.8
NPHP1O15259 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.82□□□□□ -1.8
NPHP1O15259 AC121334.2-201ENST00000605387 271 ntBASIC3.82□□□□□ -1.8
NPHP1O15259 AC010149.2-201ENST00000637608 315 ntBASIC3.82□□□□□ -1.8
NPHP1O15259 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NPHP1O15259 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPHP1O15259 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPHP1O15259 RNU5F-7P-201ENST00000363696 115 ntBASIC3.81□□□□□ -1.8
NPHP1O15259 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.81□□□□□ -1.8
NPHP1O15259 ZNF863P-201ENST00000426746 417 ntBASIC3.81□□□□□ -1.8
NPHP1O15259 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.81□□□□□ -1.8
NPHP1O15259 AC129850.1-201ENST00000436203 508 ntBASIC3.81□□□□□ -1.8
NPHP1O15259 AC105272.1-201ENST00000438604 198 ntBASIC3.81□□□□□ -1.8
NPHP1O15259 HMGB3P11-201ENST00000440127 604 ntBASIC3.81□□□□□ -1.8
NPHP1O15259 MTND1P30-201ENST00000441241 901 ntBASIC3.81□□□□□ -1.8
NPHP1O15259 AL135938.1-201ENST00000443141 297 ntBASIC3.81□□□□□ -1.8
NPHP1O15259 DDX3P2-201ENST00000446138 111 ntBASIC3.81□□□□□ -1.8
NPHP1O15259 AC125238.1-201ENST00000448842 249 ntBASIC3.81□□□□□ -1.8
NPHP1O15259 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.81□□□□□ -1.8
NPHP1O15259 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.81□□□□□ -1.8
NPHP1O15259 AL160314.1-201ENST00000490836 438 ntBASIC3.81□□□□□ -1.8
NPHP1O15259 AC114797.1-201ENST00000514003 728 ntBASIC3.81□□□□□ -1.8
NPHP1O15259 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.81□□□□□ -1.8
NPHP1O15259 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.81□□□□□ -1.8
NPHP1O15259 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.81□□□□□ -1.8
NPHP1O15259 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.81□□□□□ -1.8
NPHP1O15259 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.81□□□□□ -1.8
NPHP1O15259 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.81□□□□□ -1.8
NPHP1O15259 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.81□□□□□ -1.8
NPHP1O15259 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.81□□□□□ -1.8
NPHP1O15259 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPHP1O15259 MIR4319-201ENST00000577285 85 ntBASIC3.81□□□□□ -1.8
NPHP1O15259 MIR3118-1-201ENST00000581787 76 ntBASIC3.81□□□□□ -1.8
NPHP1O15259 AC083760.1-201ENST00000589621 670 ntBASIC3.81□□□□□ -1.8
NPHP1O15259 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.81□□□□□ -1.8
NPHP1O15259 AL035413.2-201ENST00000604801 525 ntBASIC3.81□□□□□ -1.8
NPHP1O15259 AC008277.2-201ENST00000605196 797 ntBASIC3.81□□□□□ -1.8
NPHP1O15259 AC013412.1-201ENST00000610687 192 ntBASIC3.81□□□□□ -1.8
NPHP1O15259 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPHP1O15259 AC092140.2-201ENST00000618027 521 ntBASIC3.81□□□□□ -1.8
NPHP1O15259 AC068057.2-201ENST00000624047 895 ntBASIC3.81□□□□□ -1.8
NPHP1O15259 AC007494.3-201ENST00000624660 743 ntBASIC3.81□□□□□ -1.8
NPHP1O15259 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.81□□□□□ -1.8
NPHP1O15259 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.8□□□□□ -1.8
NPHP1O15259 RNU5E-5P-201ENST00000365379 116 ntBASIC3.8□□□□□ -1.8
NPHP1O15259 RNU6-140P-201ENST00000384566 108 ntBASIC3.8□□□□□ -1.8
NPHP1O15259 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPHP1O15259 Y_RNA.608-201ENST00000410647 95 ntBASIC3.8□□□□□ -1.8
NPHP1O15259 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.8□□□□□ -1.8
NPHP1O15259 MED14P1-201ENST00000430517 648 ntBASIC3.8□□□□□ -1.8
NPHP1O15259 RPL32P28-201ENST00000443577 397 ntBASIC3.8□□□□□ -1.8
NPHP1O15259 HMGN1P18-201ENST00000457642 277 ntBASIC3.8□□□□□ -1.8
NPHP1O15259 RPL7P5-201ENST00000471472 736 ntBASIC3.8□□□□□ -1.8
NPHP1O15259 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.8□□□□□ -1.8
NPHP1O15259 SNORA64.4-201ENST00000516632 81 ntBASIC3.8□□□□□ -1.8
NPHP1O15259 SNORA31.21-201ENST00000517180 77 ntBASIC3.8□□□□□ -1.8
NPHP1O15259 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.8□□□□□ -1.8
NPHP1O15259 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.8□□□□□ -1.8
NPHP1O15259 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.8□□□□□ -1.8
NPHP1O15259 AC109446.2-201ENST00000567872 497 ntBASIC3.8□□□□□ -1.8
NPHP1O15259 MIR3162-201ENST00000581818 82 ntBASIC3.8□□□□□ -1.8
NPHP1O15259 MIR4435-1-201ENST00000582552 80 ntBASIC3.8□□□□□ -1.8
NPHP1O15259 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.8□□□□□ -1.8
NPHP1O15259 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.8□□□□□ -1.8
NPHP1O15259 U73023.1-201ENST00000603134 700 ntBASIC3.8□□□□□ -1.8
NPHP1O15259 BX664608.1-201ENST00000610519 487 ntBASIC3.8□□□□□ -1.8
NPHP1O15259 AC138749.5-201ENST00000611461 208 ntBASIC3.8□□□□□ -1.8
NPHP1O15259 AC116165.2-201ENST00000616705 206 ntBASIC3.8□□□□□ -1.8
NPHP1O15259 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
NPHP1O15259 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.8□□□□□ -1.8
NPHP1O15259 AC091953.2-201ENST00000623979 160 ntBASIC3.8□□□□□ -1.8
NPHP1O15259 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.8□□□□□ -1.8
NPHP1O15259 AC019226.2-201ENST00000625973 424 ntBASIC3.8□□□□□ -1.8
NPHP1O15259 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NPHP1O15259 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.8□□□□□ -1.8
NPHP1O15259 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
NPHP1O15259 AC092104.1-201ENST00000497346 1441 ntBASIC3.79□□□□□ -1.8
NPHP1O15259 AC007496.3-201ENST00000624987 3443 ntBASIC3.79□□□□□ -1.8
NPHP1O15259 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPHP1O15259 MIR148B-201ENST00000362252 99 ntBASIC3.79□□□□□ -1.8
NPHP1O15259 RNY4P16-201ENST00000364768 94 ntBASIC3.79□□□□□ -1.8
NPHP1O15259 AL139397.2-201ENST00000404529 772 ntBASIC3.79□□□□□ -1.8
NPHP1O15259 RNU2-62P-201ENST00000410868 191 ntBASIC3.79□□□□□ -1.8
NPHP1O15259 AC010153.1-201ENST00000432862 727 ntBASIC3.79□□□□□ -1.8
NPHP1O15259 AC087588.1-201ENST00000462203 316 ntBASIC3.79□□□□□ -1.8
NPHP1O15259 AC138853.1-201ENST00000503549 823 ntBASIC3.79□□□□□ -1.8
NPHP1O15259 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.79□□□□□ -1.8
NPHP1O15259 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.79□□□□□ -1.8
NPHP1O15259 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.79□□□□□ -1.8
NPHP1O15259 MTND3P12-201ENST00000559068 328 ntBASIC3.79□□□□□ -1.8
NPHP1O15259 AC239868.4-201ENST00000608318 671 ntBASIC3.79□□□□□ -1.8
NPHP1O15259 FTX_3.1-201ENST00000610451 147 ntBASIC3.79□□□□□ -1.8
NPHP1O15259 AL161629.2-201ENST00000615347 275 ntBASIC3.79□□□□□ -1.8
NPHP1O15259 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPHP1O15259 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPHP1O15259 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.78□□□□□ -1.8
NPHP1O15259 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.78□□□□□ -1.8
NPHP1O15259 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NPHP1O15259 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.78□□□□□ -1.8
NPHP1O15259 RNU6-1027P-201ENST00000383998 107 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms