Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.51□□□□□ -2.17
SDCBPO00560 AC007182.2-201ENST00000489251 402 ntBASIC1.51□□□□□ -2.17
SDCBPO00560 AC138853.1-201ENST00000503549 823 ntBASIC1.51□□□□□ -2.17
SDCBPO00560 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.51□□□□□ -2.17
SDCBPO00560 AC092436.1-201ENST00000506450 503 ntBASIC1.51□□□□□ -2.17
SDCBPO00560 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.51□□□□□ -2.17
SDCBPO00560 AP005902.1-201ENST00000521358 186 ntBASIC1.51□□□□□ -2.17
SDCBPO00560 RANP3-201ENST00000530970 276 ntBASIC1.51□□□□□ -2.17
SDCBPO00560 CYCSP26-201ENST00000534107 320 ntBASIC1.51□□□□□ -2.17
SDCBPO00560 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.51□□□□□ -2.17
SDCBPO00560 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.51□□□□□ -2.17
SDCBPO00560 AC007375.1-201ENST00000554513 578 ntBASIC1.51□□□□□ -2.17
SDCBPO00560 HSPE1P3-201ENST00000559254 309 ntBASIC1.51□□□□□ -2.17
SDCBPO00560 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.51□□□□□ -2.17
SDCBPO00560 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.51□□□□□ -2.17
SDCBPO00560 MIR5571-201ENST00000577998 113 ntBASIC1.51□□□□□ -2.17
SDCBPO00560 MIR4513-201ENST00000581077 86 ntBASIC1.51□□□□□ -2.17
SDCBPO00560 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.51□□□□□ -2.17
SDCBPO00560 AP001429.1-201ENST00000602568 530 ntBASIC1.51□□□□□ -2.17
SDCBPO00560 MTND4LP5-201ENST00000605152 292 ntBASIC1.51□□□□□ -2.17
SDCBPO00560 AC084824.4-201ENST00000620106 731 ntBASIC1.51□□□□□ -2.17
SDCBPO00560 AC091932.3-201ENST00000624223 323 ntBASIC1.51□□□□□ -2.17
SDCBPO00560 OR1S1-201ENST00000624470 978 ntBASIC1.51□□□□□ -2.17
SDCBPO00560 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SDCBPO00560 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
SDCBPO00560 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
SDCBPO00560 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SDCBPO00560 RNU6-1066P-201ENST00000363573 105 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 SNORD48-201ENST00000364953 64 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 RNU6-549P-201ENST00000384433 107 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 AL450338.1-201ENST00000407987 512 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 RNU2-49P-201ENST00000410666 184 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.5□□□□□ -2.17
SDCBPO00560 CYCSP48-201ENST00000417124 323 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 DEFB130D-201ENST00000426866 237 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 FO393414.1-201ENST00000428697 1184 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 AL356867.1-201ENST00000429623 299 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.5□□□□□ -2.17
SDCBPO00560 AC003989.2-201ENST00000440224 169 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 USP9YP15-201ENST00000442391 422 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.5□□□□□ -2.17
SDCBPO00560 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.5□□□□□ -2.17
SDCBPO00560 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.5□□□□□ -2.17
SDCBPO00560 AC072039.1-201ENST00000477611 581 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 RPL21P99-201ENST00000480369 423 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.5□□□□□ -2.17
SDCBPO00560 AC010460.2-201ENST00000509054 677 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 AC121161.1-201ENST00000510606 652 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 AC006499.2-201ENST00000513470 337 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 RNU5F-8P-201ENST00000515941 111 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 AC022634.1-201ENST00000520765 532 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.5□□□□□ -2.17
SDCBPO00560 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.5□□□□□ -2.17
SDCBPO00560 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.5□□□□□ -2.17
SDCBPO00560 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.5□□□□□ -2.17
SDCBPO00560 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.5□□□□□ -2.17
SDCBPO00560 MIR3618-201ENST00000580330 88 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.5□□□□□ -2.17
SDCBPO00560 AC107214.2-201ENST00000608204 634 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 DUXAP10-204ENST00000612052 616 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 AL161423.1-201ENST00000613700 262 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 AL118556.2-201ENST00000614375 824 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 AC008443.7-201ENST00000622195 246 ntBASIC1.5□□□□□ -2.17
SDCBPO00560 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.5□□□□□ -2.17
SDCBPO00560 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SDCBPO00560 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SDCBPO00560 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.5□□□□□ -2.17
SDCBPO00560 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.49□□□□□ -2.17
SDCBPO00560 RNA5SP363-201ENST00000365072 115 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 MCTS2P-201ENST00000394552 546 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 RPL22P22-201ENST00000395439 379 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 DHFRP6-201ENST00000401776 268 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 AL109755.1-201ENST00000401791 649 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 AL590383.1-201ENST00000428602 75 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.49□□□□□ -2.17
SDCBPO00560 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.49□□□□□ -2.17
SDCBPO00560 AL136380.1-201ENST00000447970 162 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SDCBPO00560 AP1S2P1-201ENST00000457344 379 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 AL121769.1-201ENST00000469473 401 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.49□□□□□ -2.17
SDCBPO00560 RPS15AP17-201ENST00000470598 390 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 AC068781.1-201ENST00000488231 618 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 BOLA3P3-201ENST00000505182 232 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 AC114786.4-201ENST00000508771 728 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 AC023141.11-201ENST00000508864 202 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.49□□□□□ -2.17
SDCBPO00560 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.49□□□□□ -2.17
SDCBPO00560 AC107393.1-201ENST00000512403 346 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 RPL23AP94-201ENST00000512518 302 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 AC114797.1-201ENST00000514003 728 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 AC023632.1-201ENST00000518463 375 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
SDCBPO00560 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.49□□□□□ -2.17
SDCBPO00560 AC110588.1-201ENST00000559699 137 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.49□□□□□ -2.17
SDCBPO00560 AC090330.1-201ENST00000588646 764 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 AC025588.2-201ENST00000604851 466 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 AC026741.1-201ENST00000605892 482 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 AC080013.4-201ENST00000607624 649 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms