Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 RPS29P4-201ENST00000414733 161 ntBASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 AC006366.1-201ENST00000422002 759 ntBASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 AC018644.1-201ENST00000429934 551 ntBASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 AC093156.1-201ENST00000440382 670 ntBASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 ATP5C1P1-201ENST00000441945 895 ntBASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 AL133547.1-201ENST00000448546 220 ntBASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 AC138853.1-201ENST00000503549 823 ntBASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 RNA5SP471-201ENST00000516971 106 ntBASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 RNA5SP290-201ENST00000517133 127 ntBASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 SNORA31.21-201ENST00000517180 77 ntBASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 PAICSP4-201ENST00000517543 1253 ntBASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 AP006587.4-201ENST00000526053 529 ntBASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 AC128657.1-201ENST00000549459 145 ntBASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 RPL21P5-201ENST00000554662 472 ntBASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 MIR4276-201ENST00000584832 70 ntBASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 AC008739.2-201ENST00000597006 317 ntBASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 AL020997.2-201ENST00000602607 184 ntBASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CPSF2Q9P2I0 AL161431.1-201ENST00000618966 4205 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AC099654.7-201ENST00000635788 2127 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 RNU6-1167P-201ENST00000363227 94 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 RNU6-701P-201ENST00000384059 107 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AC245054.2-201ENST00000415639 319 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AC009518.2-201ENST00000418056 731 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AC069157.1-201ENST00000421749 137 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 MTND1P28-201ENST00000435623 950 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AC129850.1-201ENST00000436203 508 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AL714022.1-201ENST00000439897 151 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 GSTA11P-201ENST00000452866 669 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 SNRPFP4-201ENST00000456366 242 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 RN7SL542P-201ENST00000467147 294 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 RNA5SP76-201ENST00000516277 87 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 RNU6-826P-201ENST00000516827 104 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 RNA5SP337-201ENST00000517007 109 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AC023632.4-201ENST00000517783 191 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 MTND2P38-201ENST00000522536 667 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AC012414.6-201ENST00000568241 401 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AC009977.1-201ENST00000586015 570 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 Z99497.2-201ENST00000603634 310 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 Z94722.1-201ENST00000604328 474 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AL136363.1-201ENST00000605349 337 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AC239868.4-201ENST00000608318 671 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AC034102.8-201ENST00000615146 484 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AC099506.2-201ENST00000623074 221 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 MIR3974-201ENST00000637126 96 ntBASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.2□□□□□ -1.9
CPSF2Q9P2I0 AL161912.2-201ENST00000565707 3007 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 Y_RNA.245-201ENST00000364493 95 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 RNY3P9-201ENST00000384727 106 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 SNORA46-201ENST00000384762 135 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 SEPT2P1-201ENST00000419651 180 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 RAC1P6-201ENST00000423911 575 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 PGBD4P3-201ENST00000440731 581 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 RPL12P25-201ENST00000455592 494 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 SNRPGP9-201ENST00000456025 225 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 SNORD97-201ENST00000459187 142 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 AIG1P1-201ENST00000503376 148 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 AC010587.1-201ENST00000505809 469 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms