Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 UBE2L2-201ENST00000254302 429 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
NPAS1Q99742 MIR199A2-201ENST00000385289 110 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 RPL32P23-201ENST00000397237 405 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.48□□□□□ -1.85
NPAS1Q99742 YPEL5P1-201ENST00000419731 367 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.48□□□□□ -1.85
NPAS1Q99742 AL139247.1-201ENST00000422768 325 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 NDUFB4P7-201ENST00000423198 363 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 AC091390.3-201ENST00000426478 338 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.48□□□□□ -1.85
NPAS1Q99742 CALM2P2-201ENST00000428512 440 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 ARF4P2-201ENST00000430209 526 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 ATP5HP2-201ENST00000433885 485 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 AC092573.2-201ENST00000434546 243 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 SNORA71B-202ENST00000439232 272 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 PIGFP3-201ENST00000441918 722 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.48□□□□□ -1.85
NPAS1Q99742 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.48□□□□□ -1.85
NPAS1Q99742 AC009237.8-201ENST00000445492 379 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 FGF7P6-202ENST00000451282 293 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.48□□□□□ -1.85
NPAS1Q99742 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.48□□□□□ -1.85
NPAS1Q99742 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.48□□□□□ -1.85
NPAS1Q99742 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.48□□□□□ -1.85
NPAS1Q99742 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.48□□□□□ -1.85
NPAS1Q99742 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.48□□□□□ -1.85
NPAS1Q99742 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.48□□□□□ -1.85
NPAS1Q99742 PRDX4P1-201ENST00000507189 574 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NPAS1Q99742 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.48□□□□□ -1.85
NPAS1Q99742 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.48□□□□□ -1.85
NPAS1Q99742 RNU1-61P-201ENST00000516107 151 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.48□□□□□ -1.85
NPAS1Q99742 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.48□□□□□ -1.85
NPAS1Q99742 ATP5F1P5-201ENST00000526403 760 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 OR5BN1P-201ENST00000532955 829 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.48□□□□□ -1.85
NPAS1Q99742 HIF1AP1-201ENST00000553642 175 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 AC090877.1-201ENST00000561418 344 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.48□□□□□ -1.85
NPAS1Q99742 AC087499.8-201ENST00000578406 226 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.48□□□□□ -1.85
NPAS1Q99742 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.48□□□□□ -1.85
NPAS1Q99742 AC008945.2-201ENST00000606056 604 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NPAS1Q99742 AC012409.4-201ENST00000612923 249 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 AC002553.4-201ENST00000616896 331 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 AC011155.2-201ENST00000623202 216 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 FER-210ENST00000628534 558 ntTSL 5 BASIC3.48□□□□□ -1.85
NPAS1Q99742 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.48□□□□□ -1.85
NPAS1Q99742 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.48□□□□□ -1.85
NPAS1Q99742 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
NPAS1Q99742 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.48□□□□□ -1.85
NPAS1Q99742 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NPAS1Q99742 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NPAS1Q99742 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NPAS1Q99742 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NPAS1Q99742 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.48□□□□□ -1.85
NPAS1Q99742 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NPAS1Q99742 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
NPAS1Q99742 MFSD8-236ENST00000641509 4050 ntBASIC3.48□□□□□ -1.85
NPAS1Q99742 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NPAS1Q99742 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
NPAS1Q99742 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NPAS1Q99742 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPAS1Q99742 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.47□□□□□ -1.85
NPAS1Q99742 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.47□□□□□ -1.85
NPAS1Q99742 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
NPAS1Q99742 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPAS1Q99742 RNU6-512P-201ENST00000364438 103 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 RNU6-817P-201ENST00000391083 104 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 RNU6-1197P-201ENST00000391183 107 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 AL356967.1-201ENST00000406305 431 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 RNU2-29P-201ENST00000410423 189 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 RPS12P24-201ENST00000412619 387 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 AC092809.3-201ENST00000415453 231 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 BX842559.1-201ENST00000419615 532 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 TMEM167AP1-201ENST00000423409 219 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 AL451062.2-201ENST00000427515 271 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 RPL7P2-201ENST00000427639 268 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.47□□□□□ -1.85
NPAS1Q99742 AC000111.3-201ENST00000433478 193 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 CBWD4P-201ENST00000445695 655 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 CACYBPP2-201ENST00000453625 678 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 SNRPFP3-201ENST00000457792 225 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.47□□□□□ -1.85
NPAS1Q99742 GMFBP1-201ENST00000467831 427 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 RPS15AP34-201ENST00000487776 387 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.47□□□□□ -1.85
NPAS1Q99742 RN7SKP13-201ENST00000515933 244 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.47□□□□□ -1.85
NPAS1Q99742 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.47□□□□□ -1.85
NPAS1Q99742 AC004024.1-201ENST00000549244 247 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.47□□□□□ -1.85
NPAS1Q99742 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.47□□□□□ -1.85
NPAS1Q99742 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.47□□□□□ -1.85
NPAS1Q99742 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.47□□□□□ -1.85
NPAS1Q99742 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 204.7 ms