Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 HSFY6P-201ENST00000445573 403 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 AC027575.1-201ENST00000481064 460 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 AP002812.1-201ENST00000495378 474 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 AC005741.1-201ENST00000511094 432 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 GMPSP1-201ENST00000514075 579 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 RNU2-69P-201ENST00000516061 100 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 COPS8P3-201ENST00000526024 482 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 DYNLL1P4-201ENST00000549314 266 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 AC012182.1-201ENST00000570133 895 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 MIR5690-201ENST00000583739 73 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 MIR3171-201ENST00000584270 74 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 AC006504.6-201ENST00000590142 199 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 AC080078.3-201ENST00000605407 463 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 AL080274.1-201ENST00000605565 220 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 MIR6867-201ENST00000610636 67 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 AC091905.2-201ENST00000623143 306 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 MTND4LP32-201ENST00000636111 270 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 RNU1-14P-201ENST00000362759 152 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 RNU6-1252P-201ENST00000363054 104 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 Y_RNA.187-201ENST00000363918 113 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 Y_RNA.202-201ENST00000364083 110 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 RNU6-715P-201ENST00000365204 103 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 RNA5SP283-201ENST00000365604 119 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 Y_RNA.395-201ENST00000383945 109 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 MIR93-201ENST00000385024 80 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 RPL5P18-201ENST00000406671 891 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 RNU4-14P-201ENST00000410858 122 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 AL356095.1-201ENST00000417217 199 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 RPS12P23-201ENST00000419579 400 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 AC244098.2-201ENST00000422068 99 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 RPL23AP25-201ENST00000430973 463 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 SNORA84-201ENST00000459229 133 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 RPL31P60-201ENST00000478450 367 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 RN7SL812P-201ENST00000493791 279 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 RPS27P27-201ENST00000498779 255 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 RNU6-327P-201ENST00000516270 127 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 RNU6-1069P-201ENST00000516612 133 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 RNU6-273P-201ENST00000516937 96 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 OR8R1P-201ENST00000543943 764 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 AC034105.4-201ENST00000568304 277 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 AC138761.3-201ENST00000579993 334 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 SNRPGP17-201ENST00000603780 214 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 AC124303.1-201ENST00000605703 360 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 AL138726.1-201ENST00000614873 333 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 AL359757.2-201ENST00000624309 274 ntBASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RUFY4Q6ZNE9 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 Y_RNA.146-201ENST00000363549 102 ntBASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 RNA5SP175-201ENST00000364275 119 ntBASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 RHOT1P2-201ENST00000366423 333 ntBASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 SNORA36C-201ENST00000384289 132 ntBASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 CISD1P1-201ENST00000393907 327 ntBASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 AL590704.1-201ENST00000402856 794 ntBASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 RNU6-954P-201ENST00000411355 107 ntBASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 MTND2P23-201ENST00000422990 651 ntBASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 MTCO1P39-201ENST00000426148 480 ntBASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 AL669831.1-202ENST00000428504 417 ntBASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 COX6B1P7-201ENST00000430845 235 ntBASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 AC005019.1-201ENST00000436455 431 ntBASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 RPL26P6-201ENST00000440913 438 ntBASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.76□□□□□ -1.65
RUFY4Q6ZNE9 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 261.6 ms