Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PACS1Q6VY07 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PACS1Q6VY07 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.26□□□□□ -1.89
PACS1Q6VY07 HMGN1P24-201ENST00000412282 298 ntBASIC3.26□□□□□ -1.89
PACS1Q6VY07 RPL32P35-201ENST00000415214 394 ntBASIC3.26□□□□□ -1.89
PACS1Q6VY07 DUTP6-201ENST00000425573 462 ntBASIC3.26□□□□□ -1.89
PACS1Q6VY07 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.26□□□□□ -1.89
PACS1Q6VY07 AC097713.2-201ENST00000430199 356 ntBASIC3.26□□□□□ -1.89
PACS1Q6VY07 AC244505.4-201ENST00000434905 287 ntBASIC3.26□□□□□ -1.89
PACS1Q6VY07 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.26□□□□□ -1.89
PACS1Q6VY07 AC004866.2-201ENST00000438285 481 ntBASIC3.26□□□□□ -1.89
PACS1Q6VY07 SSXP5-201ENST00000443473 287 ntBASIC3.26□□□□□ -1.89
PACS1Q6VY07 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.26□□□□□ -1.89
PACS1Q6VY07 RPL23AP20-201ENST00000447965 421 ntBASIC3.26□□□□□ -1.89
PACS1Q6VY07 RPL23AP31-201ENST00000456160 467 ntBASIC3.26□□□□□ -1.89
PACS1Q6VY07 AC146507.2-201ENST00000460608 476 ntBASIC3.26□□□□□ -1.89
PACS1Q6VY07 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PACS1Q6VY07 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.26□□□□□ -1.89
PACS1Q6VY07 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.26□□□□□ -1.89
PACS1Q6VY07 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.26□□□□□ -1.89
PACS1Q6VY07 NCAPGP2-201ENST00000557911 754 ntBASIC3.26□□□□□ -1.89
PACS1Q6VY07 AC074050.1-201ENST00000563247 211 ntBASIC3.26□□□□□ -1.89
PACS1Q6VY07 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.26□□□□□ -1.89
PACS1Q6VY07 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.26□□□□□ -1.89
PACS1Q6VY07 MIR3682-201ENST00000581338 84 ntBASIC3.26□□□□□ -1.89
PACS1Q6VY07 AL021997.1-201ENST00000605757 193 ntBASIC3.26□□□□□ -1.89
PACS1Q6VY07 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.26□□□□□ -1.89
PACS1Q6VY07 AC087241.4-201ENST00000612441 480 ntBASIC3.26□□□□□ -1.89
PACS1Q6VY07 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.26□□□□□ -1.89
PACS1Q6VY07 MIR7975-201ENST00000619350 68 ntBASIC3.26□□□□□ -1.89
PACS1Q6VY07 AL359740.1-201ENST00000624340 592 ntBASIC3.26□□□□□ -1.89
PACS1Q6VY07 AC019226.1-201ENST00000625666 515 ntBASIC3.26□□□□□ -1.89
PACS1Q6VY07 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.25□□□□□ -1.89
PACS1Q6VY07 MTND5P26-201ENST00000426018 1752 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
PACS1Q6VY07 U3.6-201ENST00000363622 211 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 RNY3P13-201ENST00000365542 102 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 Y_RNA.582-201ENST00000391023 95 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 Y_RNA.599-201ENST00000410489 109 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 RNA5SP344-201ENST00000411081 104 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 AC127391.1-201ENST00000411737 98 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 BX323014.1-201ENST00000412876 237 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 MTND1P21-201ENST00000412991 285 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 MTCO1P39-201ENST00000426148 480 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 AC090774.1-201ENST00000435925 246 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 ARPC3P1-201ENST00000437218 533 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 RABEPKP1-201ENST00000440529 1026 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 USP9YP15-201ENST00000442391 422 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.25□□□□□ -1.89
PACS1Q6VY07 PRDX3P3-201ENST00000447765 522 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 AC079448.1-201ENST00000449377 373 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.25□□□□□ -1.89
PACS1Q6VY07 MTCYBP1-201ENST00000454315 1119 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.25□□□□□ -1.89
PACS1Q6VY07 RNU7-59P-201ENST00000459101 61 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 RBM43P1-201ENST00000476891 1081 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.25□□□□□ -1.89
PACS1Q6VY07 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.25□□□□□ -1.89
PACS1Q6VY07 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.25□□□□□ -1.89
PACS1Q6VY07 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.25□□□□□ -1.89
PACS1Q6VY07 AC114797.1-201ENST00000514003 728 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 RNU6-1220P-201ENST00000517126 108 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 MTCO2P4-201ENST00000517968 247 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 DEFB108A-201ENST00000530110 222 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.25□□□□□ -1.89
PACS1Q6VY07 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.25□□□□□ -1.89
PACS1Q6VY07 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.25□□□□□ -1.89
PACS1Q6VY07 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.25□□□□□ -1.89
PACS1Q6VY07 EIF1P4-201ENST00000572664 335 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.25□□□□□ -1.89
PACS1Q6VY07 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.25□□□□□ -1.89
PACS1Q6VY07 KC877982.1-201ENST00000602313 470 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 AP000860.1-201ENST00000605250 559 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.25□□□□□ -1.89
PACS1Q6VY07 AL157817.1-201ENST00000614264 790 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 AL133173.2-201ENST00000614270 90 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 AC006338.1-201ENST00000618453 749 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 MIR6130-201ENST00000619419 109 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 AC095031.1-201ENST00000623685 672 ntBASIC3.25□□□□□ -1.89
PACS1Q6VY07 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PACS1Q6VY07 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PACS1Q6VY07 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.24□□□□□ -1.89
PACS1Q6VY07 RN7SKP226-201ENST00000364912 300 ntBASIC3.24□□□□□ -1.89
PACS1Q6VY07 SNORA51.4-201ENST00000364993 124 ntBASIC3.24□□□□□ -1.89
PACS1Q6VY07 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
PACS1Q6VY07 RNU6-1027P-201ENST00000383998 107 ntBASIC3.24□□□□□ -1.89
PACS1Q6VY07 RNU6-1215P-201ENST00000384441 102 ntBASIC3.24□□□□□ -1.89
PACS1Q6VY07 MIR7-3-201ENST00000384898 110 ntBASIC3.24□□□□□ -1.89
PACS1Q6VY07 RNU6-754P-201ENST00000391166 107 ntBASIC3.24□□□□□ -1.89
PACS1Q6VY07 AF274854.1-201ENST00000413236 615 ntBASIC3.24□□□□□ -1.89
PACS1Q6VY07 UBE2FP1-201ENST00000416536 447 ntBASIC3.24□□□□□ -1.89
PACS1Q6VY07 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PACS1Q6VY07 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.24□□□□□ -1.89
PACS1Q6VY07 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.24□□□□□ -1.89
PACS1Q6VY07 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.24□□□□□ -1.89
PACS1Q6VY07 AC119618.1-201ENST00000434191 222 ntBASIC3.24□□□□□ -1.89
PACS1Q6VY07 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.24□□□□□ -1.89
PACS1Q6VY07 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms