Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC006249.1-201ENST00000621223 471 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
HSPG2P98160 AC073464.3-201ENST00000422564 712 ntBASIC0.62□□□□□ -2.31
HSPG2P98160 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.62□□□□□ -2.31
HSPG2P98160 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.62□□□□□ -2.31
HSPG2P98160 RPS23P3-201ENST00000470993 430 ntBASIC0.62□□□□□ -2.31
HSPG2P98160 RPL7P18-201ENST00000478965 734 ntBASIC0.62□□□□□ -2.31
HSPG2P98160 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.62□□□□□ -2.31
HSPG2P98160 AP005597.4-201ENST00000526762 229 ntBASIC0.62□□□□□ -2.31
HSPG2P98160 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC0.62□□□□□ -2.31
HSPG2P98160 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC0.62□□□□□ -2.31
HSPG2P98160 RNU6-964P-201ENST00000516524 69 ntBASIC0.62□□□□□ -2.31
HSPG2P98160 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.62□□□□□ -2.31
HSPG2P98160 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
HSPG2P98160 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
HSPG2P98160 GAS5-AS1-201ENST00000602767 694 ntBASIC0.62□□□□□ -2.31
HSPG2P98160 AL158032.1-201ENST00000605401 106 ntBASIC0.62□□□□□ -2.31
HSPG2P98160 Z69720.2-201ENST00000624755 279 ntBASIC0.62□□□□□ -2.31
HSPG2P98160 AC123912.3-201ENST00000600907 1367 ntBASIC0.62□□□□□ -2.31
HSPG2P98160 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.62□□□□□ -2.31
HSPG2P98160 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.62□□□□□ -2.31
HSPG2P98160 AC087588.2-201ENST00000617667 426 ntBASIC0.62□□□□□ -2.31
HSPG2P98160 AC004808.1-201ENST00000627671 721 ntBASIC0.62□□□□□ -2.31
HSPG2P98160 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.61□□□□□ -2.31
HSPG2P98160 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.61□□□□□ -2.31
HSPG2P98160 ELOCP6-201ENST00000429066 328 ntBASIC0.61□□□□□ -2.31
HSPG2P98160 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC0.61□□□□□ -2.31
HSPG2P98160 ELOCP12-201ENST00000458706 328 ntBASIC0.61□□□□□ -2.31
HSPG2P98160 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC0.61□□□□□ -2.31
HSPG2P98160 MIR4714-201ENST00000580728 77 ntBASIC0.61□□□□□ -2.31
HSPG2P98160 SNORD114-21-201ENST00000606412 72 ntBASIC0.61□□□□□ -2.31
HSPG2P98160 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
HSPG2P98160 RNU6-50P-201ENST00000362356 103 ntBASIC0.61□□□□□ -2.31
HSPG2P98160 SNORA62.1-201ENST00000364287 154 ntBASIC0.61□□□□□ -2.31
HSPG2P98160 Y_RNA.280-201ENST00000364765 112 ntBASIC0.61□□□□□ -2.31
HSPG2P98160 AC074117.2-201ENST00000417130 397 ntBASIC0.61□□□□□ -2.31
HSPG2P98160 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.61□□□□□ -2.31
HSPG2P98160 ARF4P4-201ENST00000439608 520 ntBASIC0.61□□□□□ -2.31
HSPG2P98160 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.61□□□□□ -2.31
HSPG2P98160 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC0.61□□□□□ -2.31
HSPG2P98160 AP003122.6-201ENST00000623831 495 ntBASIC0.61□□□□□ -2.31
HSPG2P98160 SNRPEP3-201ENST00000338402 276 ntBASIC0.61□□□□□ -2.31
HSPG2P98160 RNU6-234P-201ENST00000365229 104 ntBASIC0.61□□□□□ -2.31
HSPG2P98160 MIR936-201ENST00000401264 98 ntBASIC0.61□□□□□ -2.31
HSPG2P98160 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.61□□□□□ -2.31
HSPG2P98160 AC012497.1-201ENST00000429392 575 ntBASIC0.61□□□□□ -2.31
HSPG2P98160 AL121601.2-201ENST00000438019 707 ntBASIC0.61□□□□□ -2.31
HSPG2P98160 AC087343.1-201ENST00000477341 475 ntBASIC0.61□□□□□ -2.31
HSPG2P98160 AP003497.1-201ENST00000528472 562 ntBASIC0.61□□□□□ -2.31
HSPG2P98160 AC104229.1-201ENST00000561364 255 ntBASIC0.61□□□□□ -2.31
HSPG2P98160 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.61□□□□□ -2.31
HSPG2P98160 AC000111.3-201ENST00000433478 193 ntBASIC0.61□□□□□ -2.31
HSPG2P98160 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC0.61□□□□□ -2.31
HSPG2P98160 AC092140.2-201ENST00000618027 521 ntBASIC0.61□□□□□ -2.31
HSPG2P98160 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
HSPG2P98160 RNA5SP465-201ENST00000391195 109 ntBASIC0.6□□□□□ -2.31
HSPG2P98160 RPL21P90-201ENST00000415692 466 ntBASIC0.6□□□□□ -2.31
HSPG2P98160 TRGV6-201ENST00000417928 299 ntBASIC0.6□□□□□ -2.31
HSPG2P98160 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.6□□□□□ -2.31
HSPG2P98160 ELOCP10-201ENST00000440624 327 ntBASIC0.6□□□□□ -2.31
HSPG2P98160 AL035407.2-201ENST00000454090 378 ntBASIC0.6□□□□□ -2.31
HSPG2P98160 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.6□□□□□ -2.31
HSPG2P98160 AC096751.1-202ENST00000502691 1067 ntBASIC0.6□□□□□ -2.31
HSPG2P98160 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.6□□□□□ -2.31
HSPG2P98160 AC114322.1-201ENST00000506771 926 ntBASIC0.6□□□□□ -2.31
HSPG2P98160 ELOCP34-201ENST00000604436 327 ntBASIC0.6□□□□□ -2.31
HSPG2P98160 AC079597.1-201ENST00000624306 508 ntBASIC0.6□□□□□ -2.31
HSPG2P98160 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
HSPG2P98160 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
HSPG2P98160 Y_RNA.390-201ENST00000383932 102 ntBASIC0.6□□□□□ -2.31
HSPG2P98160 RNU4-52P-201ENST00000384209 138 ntBASIC0.6□□□□□ -2.31
HSPG2P98160 SNORD56-201ENST00000413522 71 ntBASIC0.6□□□□□ -2.31
HSPG2P98160 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC0.6□□□□□ -2.31
HSPG2P98160 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.6□□□□□ -2.31
HSPG2P98160 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC0.6□□□□□ -2.31
HSPG2P98160 RPL23AP35-201ENST00000451906 501 ntBASIC0.6□□□□□ -2.31
HSPG2P98160 RPL26P9-201ENST00000457466 433 ntBASIC0.6□□□□□ -2.31
HSPG2P98160 AC105252.1-201ENST00000503089 286 ntBASIC0.6□□□□□ -2.31
HSPG2P98160 AK3P2-201ENST00000507976 429 ntBASIC0.6□□□□□ -2.31
HSPG2P98160 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
HSPG2P98160 AC138473.1-201ENST00000605717 526 ntBASIC0.6□□□□□ -2.31
HSPG2P98160 FCF1P2-201ENST00000415284 583 ntBASIC0.6□□□□□ -2.31
HSPG2P98160 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC0.6□□□□□ -2.31
HSPG2P98160 CST2P1-201ENST00000425770 87 ntBASIC0.6□□□□□ -2.31
HSPG2P98160 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.6□□□□□ -2.31
HSPG2P98160 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.6□□□□□ -2.31
HSPG2P98160 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.6□□□□□ -2.31
HSPG2P98160 AC106052.1-201ENST00000608029 497 ntBASIC0.6□□□□□ -2.31
HSPG2P98160 HMGB1P24-202ENST00000615653 685 ntBASIC0.6□□□□□ -2.31
HSPG2P98160 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC0.6□□□□□ -2.31
HSPG2P98160 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.59□□□□□ -2.31
HSPG2P98160 TRAPPC2P5-201ENST00000426293 308 ntBASIC0.59□□□□□ -2.31
HSPG2P98160 ZNF33CP-201ENST00000432492 2030 ntBASIC0.59□□□□□ -2.31
HSPG2P98160 COX6CP18-201ENST00000448769 222 ntBASIC0.59□□□□□ -2.31
HSPG2P98160 BZW1P2-201ENST00000473537 826 ntBASIC0.59□□□□□ -2.31
HSPG2P98160 APOOP3-201ENST00000536787 586 ntBASIC0.59□□□□□ -2.31
HSPG2P98160 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.59□□□□□ -2.31
HSPG2P98160 AC073592.7-201ENST00000623659 507 ntBASIC0.59□□□□□ -2.31
HSPG2P98160 RNU6-17P-201ENST00000384245 107 ntBASIC0.59□□□□□ -2.31
HSPG2P98160 RNU6-18P-201ENST00000384527 107 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms