Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 RPL22P17-201ENST00000438729 315 ntBASIC3.85□□□□□ -1.79
NPHP1O15259 AL445567.1-201ENST00000439121 144 ntBASIC3.85□□□□□ -1.79
NPHP1O15259 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.85□□□□□ -1.79
NPHP1O15259 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.85□□□□□ -1.79
NPHP1O15259 AC112204.1-201ENST00000502591 103 ntBASIC3.85□□□□□ -1.79
NPHP1O15259 AF131216.2-201ENST00000512316 564 ntBASIC3.85□□□□□ -1.79
NPHP1O15259 MTND5P13-201ENST00000513046 1079 ntBASIC3.85□□□□□ -1.79
NPHP1O15259 RNU6-927P-201ENST00000516199 100 ntBASIC3.85□□□□□ -1.79
NPHP1O15259 RNA5SP291-201ENST00000517222 105 ntBASIC3.85□□□□□ -1.79
NPHP1O15259 AC106038.2-201ENST00000520706 568 ntBASIC3.85□□□□□ -1.79
NPHP1O15259 ATP5F1P5-201ENST00000526403 760 ntBASIC3.85□□□□□ -1.79
NPHP1O15259 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.85□□□□□ -1.79
NPHP1O15259 DNAJC8P1-201ENST00000554535 372 ntBASIC3.85□□□□□ -1.79
NPHP1O15259 AL157394.1-201ENST00000562983 1224 ntBASIC3.85□□□□□ -1.79
NPHP1O15259 AC068135.2-201ENST00000569293 1028 ntBASIC3.85□□□□□ -1.79
NPHP1O15259 MIR5697-201ENST00000578045 78 ntBASIC3.85□□□□□ -1.79
NPHP1O15259 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPHP1O15259 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.85□□□□□ -1.79
NPHP1O15259 NUTF2P8-201ENST00000604593 363 ntBASIC3.85□□□□□ -1.79
NPHP1O15259 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.85□□□□□ -1.79
NPHP1O15259 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPHP1O15259 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
NPHP1O15259 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
NPHP1O15259 RNU6-799P-201ENST00000363567 107 ntBASIC3.84□□□□□ -1.79
NPHP1O15259 RNU6-217P-201ENST00000384164 104 ntBASIC3.84□□□□□ -1.79
NPHP1O15259 RNU6-198P-201ENST00000384258 104 ntBASIC3.84□□□□□ -1.79
NPHP1O15259 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
NPHP1O15259 RN7SKP284-201ENST00000411002 343 ntBASIC3.84□□□□□ -1.79
NPHP1O15259 USP9YP13-201ENST00000417797 480 ntBASIC3.84□□□□□ -1.79
NPHP1O15259 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.84□□□□□ -1.79
NPHP1O15259 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.84□□□□□ -1.79
NPHP1O15259 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.84□□□□□ -1.79
NPHP1O15259 KATNBL1P6-201ENST00000453433 915 ntBASIC3.84□□□□□ -1.79
NPHP1O15259 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.84□□□□□ -1.79
NPHP1O15259 RPS29P26-201ENST00000477483 171 ntBASIC3.84□□□□□ -1.79
NPHP1O15259 AP000797.1-201ENST00000478870 387 ntBASIC3.84□□□□□ -1.79
NPHP1O15259 AC109486.1-201ENST00000486833 374 ntBASIC3.84□□□□□ -1.79
NPHP1O15259 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.84□□□□□ -1.79
NPHP1O15259 AC010486.1-201ENST00000511793 424 ntBASIC3.84□□□□□ -1.79
NPHP1O15259 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.84□□□□□ -1.79
NPHP1O15259 RN7SKP258-201ENST00000517151 304 ntBASIC3.84□□□□□ -1.79
NPHP1O15259 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
NPHP1O15259 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.84□□□□□ -1.79
NPHP1O15259 AP001981.2-201ENST00000603241 418 ntBASIC3.84□□□□□ -1.79
NPHP1O15259 AC092354.1-201ENST00000606057 376 ntBASIC3.84□□□□□ -1.79
NPHP1O15259 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.84□□□□□ -1.79
NPHP1O15259 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.84□□□□□ -1.8
NPHP1O15259 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
NPHP1O15259 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.83□□□□□ -1.8
NPHP1O15259 SAR1AP2-201ENST00000392696 594 ntBASIC3.83□□□□□ -1.8
NPHP1O15259 AC099548.1-201ENST00000421443 426 ntBASIC3.83□□□□□ -1.8
NPHP1O15259 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.83□□□□□ -1.8
NPHP1O15259 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.83□□□□□ -1.8
NPHP1O15259 RPS24P13-201ENST00000442520 397 ntBASIC3.83□□□□□ -1.8
NPHP1O15259 AL590365.1-201ENST00000450788 243 ntBASIC3.83□□□□□ -1.8
NPHP1O15259 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.83□□□□□ -1.8
NPHP1O15259 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.83□□□□□ -1.8
NPHP1O15259 AC083906.5-201ENST00000503722 328 ntBASIC3.83□□□□□ -1.8
NPHP1O15259 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.83□□□□□ -1.8
NPHP1O15259 AC026407.1-201ENST00000518369 204 ntBASIC3.83□□□□□ -1.8
NPHP1O15259 AC107934.1-201ENST00000522215 217 ntBASIC3.83□□□□□ -1.8
NPHP1O15259 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.83□□□□□ -1.8
NPHP1O15259 ROCK1P1-201ENST00000573767 549 ntBASIC3.83□□□□□ -1.8
NPHP1O15259 DPPA3P3-201ENST00000603842 430 ntBASIC3.83□□□□□ -1.8
NPHP1O15259 AC136601.2-201ENST00000604356 474 ntBASIC3.83□□□□□ -1.8
NPHP1O15259 AC027807.2-201ENST00000616099 408 ntBASIC3.83□□□□□ -1.8
NPHP1O15259 uc_338.12-201ENST00000616344 181 ntBASIC3.83□□□□□ -1.8
NPHP1O15259 AC073308.1-201ENST00000623696 305 ntBASIC3.83□□□□□ -1.8
NPHP1O15259 IGHVIII-44-202ENST00000636235 289 ntBASIC3.83□□□□□ -1.8
NPHP1O15259 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.83□□□□□ -1.8
NPHP1O15259 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.83□□□□□ -1.8
NPHP1O15259 SRP72P2-201ENST00000344851 1979 ntBASIC3.83□□□□□ -1.8
NPHP1O15259 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPHP1O15259 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.83□□□□□ -1.8
NPHP1O15259 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPHP1O15259 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.82□□□□□ -1.8
NPHP1O15259 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.82□□□□□ -1.8
NPHP1O15259 RNU1-75P-201ENST00000347264 129 ntBASIC3.82□□□□□ -1.8
NPHP1O15259 RNY3P13-201ENST00000365542 102 ntBASIC3.82□□□□□ -1.8
NPHP1O15259 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
NPHP1O15259 RPL17P12-201ENST00000413391 526 ntBASIC3.82□□□□□ -1.8
NPHP1O15259 ELOCP17-201ENST00000414751 326 ntBASIC3.82□□□□□ -1.8
NPHP1O15259 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.82□□□□□ -1.8
NPHP1O15259 AL139281.1-201ENST00000422120 335 ntBASIC3.82□□□□□ -1.8
NPHP1O15259 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.82□□□□□ -1.8
NPHP1O15259 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.82□□□□□ -1.8
NPHP1O15259 AL139132.1-201ENST00000431587 344 ntBASIC3.82□□□□□ -1.8
NPHP1O15259 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.82□□□□□ -1.8
NPHP1O15259 FCF1P1-201ENST00000432690 571 ntBASIC3.82□□□□□ -1.8
NPHP1O15259 RPS20P5-201ENST00000434808 360 ntBASIC3.82□□□□□ -1.8
NPHP1O15259 AL714022.1-201ENST00000439897 151 ntBASIC3.82□□□□□ -1.8
NPHP1O15259 AC093156.1-201ENST00000440382 670 ntBASIC3.82□□□□□ -1.8
NPHP1O15259 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.82□□□□□ -1.8
NPHP1O15259 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.82□□□□□ -1.8
NPHP1O15259 AC013267.1-201ENST00000458227 267 ntBASIC3.82□□□□□ -1.8
NPHP1O15259 AC116337.2-201ENST00000477662 156 ntBASIC3.82□□□□□ -1.8
NPHP1O15259 RPF2P2-201ENST00000504693 896 ntBASIC3.82□□□□□ -1.8
NPHP1O15259 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.82□□□□□ -1.8
NPHP1O15259 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.82□□□□□ -1.8
NPHP1O15259 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms