Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
MEIS3Q99687 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.63□□□□□ -1.83
MEIS3Q99687 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
MEIS3Q99687 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
MEIS3Q99687 Y_RNA.356-201ENST00000365475 113 ntBASIC3.63□□□□□ -1.83
MEIS3Q99687 RNU6-921P-201ENST00000384361 107 ntBASIC3.63□□□□□ -1.83
MEIS3Q99687 RPL21P111-201ENST00000418453 477 ntBASIC3.63□□□□□ -1.83
MEIS3Q99687 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.63□□□□□ -1.83
MEIS3Q99687 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.63□□□□□ -1.83
MEIS3Q99687 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.63□□□□□ -1.83
MEIS3Q99687 AP000542.1-201ENST00000448473 371 ntBASIC3.63□□□□□ -1.83
MEIS3Q99687 RPL31P50-201ENST00000471002 296 ntBASIC3.63□□□□□ -1.83
MEIS3Q99687 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.63□□□□□ -1.83
MEIS3Q99687 MTCYBP18-201ENST00000501056 747 ntBASIC3.63□□□□□ -1.83
MEIS3Q99687 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.63□□□□□ -1.83
MEIS3Q99687 SCGB1D5P-201ENST00000515134 247 ntBASIC3.63□□□□□ -1.83
MEIS3Q99687 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.63□□□□□ -1.83
MEIS3Q99687 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.63□□□□□ -1.83
MEIS3Q99687 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.63□□□□□ -1.83
MEIS3Q99687 ARL2BPP5-201ENST00000523141 481 ntBASIC3.63□□□□□ -1.83
MEIS3Q99687 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.63□□□□□ -1.83
MEIS3Q99687 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.63□□□□□ -1.83
MEIS3Q99687 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.63□□□□□ -1.83
MEIS3Q99687 MIR4716-201ENST00000579628 84 ntBASIC3.63□□□□□ -1.83
MEIS3Q99687 AL355816.1-201ENST00000607951 118 ntBASIC3.63□□□□□ -1.83
MEIS3Q99687 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.63□□□□□ -1.83
MEIS3Q99687 PLCE1P1-201ENST00000622094 305 ntBASIC3.63□□□□□ -1.83
MEIS3Q99687 AC093648.1-201ENST00000623546 606 ntBASIC3.63□□□□□ -1.83
MEIS3Q99687 MIR1321-201ENST00000637766 79 ntBASIC3.63□□□□□ -1.83
MEIS3Q99687 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
MEIS3Q99687 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
MEIS3Q99687 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.63□□□□□ -1.83
MEIS3Q99687 AC117529.2-201ENST00000512159 2068 ntBASIC3.63□□□□□ -1.83
MEIS3Q99687 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.62□□□□□ -1.83
MEIS3Q99687 GABRG2-229ENST00000641017 3628 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
MEIS3Q99687 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
MEIS3Q99687 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
MEIS3Q99687 Y_RNA.46-201ENST00000362695 102 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 SNORA9.2-201ENST00000365361 133 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
MEIS3Q99687 RNU6-877P-201ENST00000383868 107 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 Y_RNA.509-201ENST00000384506 99 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 RNU6-1011P-201ENST00000384668 107 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 MIR3074-201ENST00000384885 81 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 RPL5P18-201ENST00000406671 891 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
MEIS3Q99687 AC073136.2-201ENST00000417282 849 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.62□□□□□ -1.83
MEIS3Q99687 SNRPEP7-201ENST00000438350 220 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 MTND4LP16-201ENST00000440828 295 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.62□□□□□ -1.83
MEIS3Q99687 AL135938.1-201ENST00000443141 297 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.62□□□□□ -1.83
MEIS3Q99687 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.62□□□□□ -1.83
MEIS3Q99687 AC002381.1-201ENST00000447049 280 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 PMCHL2-203ENST00000457791 237 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 RNU6-420P-201ENST00000458780 107 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
MEIS3Q99687 AC010301.1-201ENST00000473936 355 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 AP004217.1-201ENST00000480579 346 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 AC007182.2-201ENST00000489251 402 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 NIPA2P2-201ENST00000496376 1083 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 MTCO2P30-201ENST00000503662 364 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 AC022447.3-201ENST00000506865 495 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.62□□□□□ -1.83
MEIS3Q99687 AC018797.3-201ENST00000513388 1241 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.62□□□□□ -1.83
MEIS3Q99687 Y_RNA.693-201ENST00000516641 110 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 RNU6-445P-201ENST00000516949 107 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 RNU6-1220P-201ENST00000517126 108 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.62□□□□□ -1.83
MEIS3Q99687 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.62□□□□□ -1.83
MEIS3Q99687 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.62□□□□□ -1.83
MEIS3Q99687 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.62□□□□□ -1.83
MEIS3Q99687 SULT1C2P1-202ENST00000562418 459 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 MIR98-201ENST00000606724 119 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 AC093732.2-201ENST00000607950 274 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.62□□□□□ -1.83
MEIS3Q99687 AP001486.2-201ENST00000561652 5113 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 AL672296.1-201ENST00000427780 2158 ntBASIC3.62□□□□□ -1.83
MEIS3Q99687 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
MEIS3Q99687 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.61□□□□□ -1.83
MEIS3Q99687 RNU1-35P-201ENST00000362782 153 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 Y_RNA.86-201ENST00000363020 111 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 RNU6-1085P-201ENST00000363576 107 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 Y_RNA.159-201ENST00000363674 87 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 Y_RNA.529-201ENST00000384586 119 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 snosnR66.1-201ENST00000391095 99 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 RPL31P52-201ENST00000407532 367 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 MIR1305-201ENST00000408300 86 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 Z92545.1-201ENST00000411782 234 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 AL592148.1-201ENST00000413568 445 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 TPMTP2-201ENST00000414372 726 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 AC012498.1-201ENST00000424037 437 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 AC022018.1-201ENST00000430685 241 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 GTF2IP20-201ENST00000431663 360 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.61□□□□□ -1.83
MEIS3Q99687 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms