Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 BX295541.1-201ENST00000417774 250 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 RPS15AP12-201ENST00000419498 388 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 AC104651.1-201ENST00000427559 735 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 OR2AS1P-201ENST00000427827 319 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 DPPA2P1-201ENST00000428060 556 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 AC133104.1-201ENST00000429100 218 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 RPL23AP69-201ENST00000431134 458 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 MTND3P21-201ENST00000433774 331 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 AC024082.2-201ENST00000434771 238 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 RPL26P6-201ENST00000440913 438 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 MTCO3P45-201ENST00000443036 613 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 MTND1P1-201ENST00000445453 368 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 RPL7P49-201ENST00000471402 708 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 RPS3AP17-201ENST00000472594 777 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 RPS15AP36-201ENST00000492022 382 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 HMGB1P29-201ENST00000505659 499 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 AC108078.1-201ENST00000508073 725 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 RNU6-64P-201ENST00000517119 105 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 ERHP1-201ENST00000523006 310 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 AC011979.2-201ENST00000527568 352 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 MIR3167-201ENST00000579623 85 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 AC004067.1-201ENST00000608733 700 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 AC103710.2-201ENST00000609912 942 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 AL133173.2-201ENST00000614270 90 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 AC012314.7-201ENST00000619693 93 ntBASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.29□□□□□ -1.88
SLC44A1Q8WWI5 AF117829.1-206ENST00000621883 3802 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 SDAD1P2-201ENST00000441308 2028 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 SNORA63.1-201ENST00000362493 131 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 RNU6-1284P-201ENST00000363701 100 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 SNORA70.4-201ENST00000365509 134 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 SNORA20.2-201ENST00000383922 131 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 RNU6-1103P-201ENST00000384150 107 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 RNU6-1215P-201ENST00000384441 102 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 RPL21P3-201ENST00000395517 478 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AF274854.1-201ENST00000413236 615 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 UBE2FP1-201ENST00000416536 447 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 RPL31P35-201ENST00000431058 377 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 NANOGNBP1-201ENST00000448444 480 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 RPL23AP31-201ENST00000456160 467 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 snoU13.22-201ENST00000459428 104 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AC146507.2-201ENST00000460608 476 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AC091179.1-201ENST00000461606 579 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AC008481.1-201ENST00000463278 396 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 RPS27AP1-201ENST00000475545 471 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AC004924.1-201ENST00000480160 781 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AC107401.1-201ENST00000503426 685 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 VN1R104P-201ENST00000505115 1009 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AC022616.3-201ENST00000523940 148 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 SNRPGP16-201ENST00000533275 226 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AC087883.1-201ENST00000551882 391 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 DEFB131E-202ENST00000602581 683 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AC004492.1-201ENST00000607036 742 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AC019176.2-201ENST00000611579 315 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AC006338.1-201ENST00000618453 749 ntBASIC3.28□□□□□ -1.88
SLC44A1Q8WWI5 AC138649.3-201ENST00000622154 254 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms