Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RAC1P6-201ENST00000423911 575 ntBASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 RWDD4P2-201ENST00000426392 563 ntBASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 RPS6P12-201ENST00000432491 726 ntBASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 AC098614.3-201ENST00000438957 440 ntBASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 GMFBP1-201ENST00000467831 427 ntBASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 MTCYBP18-201ENST00000501056 747 ntBASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 Vault.1-201ENST00000516474 102 ntBASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 AC087369.1-201ENST00000520775 996 ntBASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 AP004371.1-201ENST00000525240 214 ntBASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 AC103843.2-201ENST00000530523 682 ntBASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 AC015917.1-201ENST00000579654 510 ntBASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 AC012443.1-201ENST00000605605 231 ntBASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 RNU1-30P-201ENST00000606575 163 ntBASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.56□□□□□ -1.68
SMC1BQ8NDV3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 MTND4P12-201ENST00000498999 1377 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 RNU6-960P-201ENST00000364056 120 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 SNORA62.1-201ENST00000364287 154 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 SNORA23-201ENST00000365128 182 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 AL354719.1-201ENST00000406535 843 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 RNU6-1068P-201ENST00000410958 103 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 RPL7AP73-201ENST00000413490 353 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 AL513185.2-201ENST00000425543 193 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 AC090774.1-201ENST00000435925 246 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 AL671855.1-201ENST00000446875 1203 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 RN7SL432P-201ENST00000484057 298 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 AC096576.1-201ENST00000489014 359 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 NIPA2P2-201ENST00000496376 1083 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 AC008628.2-201ENST00000502605 298 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 AC046134.1-201ENST00000514454 666 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 RNU6-390P-201ENST00000516259 103 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 AC022695.1-201ENST00000522089 237 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 CENPUP1-201ENST00000526649 1202 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 BNIP3P9-201ENST00000603714 553 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 LARP7P1-201ENST00000605576 316 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 AC110801.1-201ENST00000623590 212 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 U6.114-201ENST00000636407 96 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 PNPT1P2-201ENST00000456768 2050 ntBASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SMC1BQ8NDV3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 CBX3P1-201ENST00000325243 554 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 Y_RNA.70-201ENST00000362886 110 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 SNORD37.1-201ENST00000390968 65 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 AL139095.1-201ENST00000404326 391 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 TXNP7-201ENST00000406296 293 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 AC017083.1-201ENST00000428093 483 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 MTND4P25-201ENST00000441039 533 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 CACYBPP2-201ENST00000453625 678 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 RPS20P20-201ENST00000460498 340 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 MRPS17P3-201ENST00000465453 385 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 AC010486.1-201ENST00000511793 424 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 AC023141.12-201ENST00000512399 199 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 LRRC34P2-201ENST00000514850 553 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 IGKV2-38-201ENST00000517443 247 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 AC093012.1-202ENST00000549403 582 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 AL451007.1-201ENST00000595491 289 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 AL022099.1-201ENST00000604551 712 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms