Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC107952.2-201ENST00000606048 486 ntBASIC2.6□□□□□ -1.99
NIPAL3Q6P499 AC079395.3-201ENST00000615161 484 ntBASIC2.6□□□□□ -1.99
NIPAL3Q6P499 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NIPAL3Q6P499 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
NIPAL3Q6P499 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NIPAL3Q6P499 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.6□□□□□ -1.99
NIPAL3Q6P499 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
NIPAL3Q6P499 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.59□□□□□ -1.99
NIPAL3Q6P499 GNG5P1-201ENST00000255500 204 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 Y_RNA.302-201ENST00000364997 102 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 SNORA72.3-201ENST00000365074 132 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 U8.9-201ENST00000365667 134 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 MIR512-1-201ENST00000384913 84 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 MIR627-201ENST00000384979 97 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 RPL21P75-201ENST00000396599 483 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 RPL21P28-201ENST00000401418 483 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AL592114.1-201ENST00000403842 483 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AL359634.1-202ENST00000404721 284 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AC109583.1-201ENST00000432156 268 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.59□□□□□ -1.99
NIPAL3Q6P499 SNRPEP9-201ENST00000436794 238 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AL354941.1-201ENST00000438600 464 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AL831737.1-201ENST00000441288 271 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 MTATP6P30-201ENST00000443540 664 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AL606517.1-201ENST00000446914 387 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 Z73417.1-201ENST00000447373 778 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 GSTA11P-201ENST00000452866 669 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AC108059.3-201ENST00000456388 214 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 RPL21P39-201ENST00000463605 483 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 RPL21P93-201ENST00000480465 489 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AC087190.1-201ENST00000484462 480 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 RPS29P20-201ENST00000489592 171 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AC093591.1-201ENST00000491435 481 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 RPL21P16-201ENST00000495531 483 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AC105252.1-201ENST00000503089 286 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
NIPAL3Q6P499 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.59□□□□□ -1.99
NIPAL3Q6P499 RNU6-64P-201ENST00000517119 105 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 DEFB108A-201ENST00000530110 222 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.59□□□□□ -1.99
NIPAL3Q6P499 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NIPAL3Q6P499 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.59□□□□□ -1.99
NIPAL3Q6P499 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AC103810.1-201ENST00000579873 453 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AC023043.3-201ENST00000593113 385 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 DPPA3P3-201ENST00000603842 430 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 AL355493.4-201ENST00000618530 292 ntBASIC2.59□□□□□ -1.99
NIPAL3Q6P499 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.59□□□□□ -1.99
NIPAL3Q6P499 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
NIPAL3Q6P499 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -2
NIPAL3Q6P499 AC006378.2-201ENST00000623178 2476 ntBASIC2.59□□□□□ -2
NIPAL3Q6P499 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NIPAL3Q6P499 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NIPAL3Q6P499 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.58□□□□□ -2
NIPAL3Q6P499 RNU5A-8P-201ENST00000364102 114 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.58□□□□□ -2
NIPAL3Q6P499 RNU6-1200P-201ENST00000384162 107 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 SNORA9-201ENST00000384215 133 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 MIR128-1-201ENST00000384921 82 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.58□□□□□ -2
NIPAL3Q6P499 AL122016.1-201ENST00000403365 367 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 RPL7P10-201ENST00000417407 739 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.58□□□□□ -2
NIPAL3Q6P499 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.58□□□□□ -2
NIPAL3Q6P499 ELOCP14-201ENST00000428070 331 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.58□□□□□ -2
NIPAL3Q6P499 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.58□□□□□ -2
NIPAL3Q6P499 MTND1P20-201ENST00000430341 950 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 AC010153.1-201ENST00000432862 727 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 RPS20P5-201ENST00000434808 360 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.58□□□□□ -2
NIPAL3Q6P499 RPS15AP5-201ENST00000436276 388 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 LARP1BP3-201ENST00000437229 869 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 ELOCP7-201ENST00000439968 331 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.58□□□□□ -2
NIPAL3Q6P499 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.58□□□□□ -2
NIPAL3Q6P499 COX6CP2-201ENST00000444980 225 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.58□□□□□ -2
NIPAL3Q6P499 NANOGNBP1-201ENST00000448444 480 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 RPL37P4-201ENST00000448908 268 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.58□□□□□ -2
NIPAL3Q6P499 RN7SL297P-201ENST00000483161 293 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 RPL23AP70-201ENST00000483361 460 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.58□□□□□ -2
NIPAL3Q6P499 AC083906.5-201ENST00000503722 328 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 HSPE1P23-201ENST00000509838 286 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 RN7SKP258-201ENST00000517151 304 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.58□□□□□ -2
NIPAL3Q6P499 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.58□□□□□ -2
NIPAL3Q6P499 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms