Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 RPL36AP6-201ENST00000435770 321 ntBASIC3.01□□□□□ -1.93
VIMP08670 AC005019.1-201ENST00000436455 431 ntBASIC3.01□□□□□ -1.93
VIMP08670 ARPC3P1-201ENST00000437218 533 ntBASIC3.01□□□□□ -1.93
VIMP08670 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.01□□□□□ -1.93
VIMP08670 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.01□□□□□ -1.93
VIMP08670 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.01□□□□□ -1.93
VIMP08670 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.01□□□□□ -1.93
VIMP08670 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.01□□□□□ -1.93
VIMP08670 AP000797.1-201ENST00000478870 387 ntBASIC3.01□□□□□ -1.93
VIMP08670 RPL21P13-201ENST00000488305 481 ntBASIC3.01□□□□□ -1.93
VIMP08670 AL160314.1-201ENST00000490836 438 ntBASIC3.01□□□□□ -1.93
VIMP08670 AC138853.1-201ENST00000503549 823 ntBASIC3.01□□□□□ -1.93
VIMP08670 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.01□□□□□ -1.93
VIMP08670 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.01□□□□□ -1.93
VIMP08670 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.01□□□□□ -1.93
VIMP08670 RN7SKP258-201ENST00000517151 304 ntBASIC3.01□□□□□ -1.93
VIMP08670 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.01□□□□□ -1.93
VIMP08670 AC106038.2-201ENST00000520706 568 ntBASIC3.01□□□□□ -1.93
VIMP08670 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.01□□□□□ -1.93
VIMP08670 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.01□□□□□ -1.93
VIMP08670 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.01□□□□□ -1.93
VIMP08670 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
VIMP08670 AC138761.3-201ENST00000579993 334 ntBASIC3.01□□□□□ -1.93
VIMP08670 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.01□□□□□ -1.93
VIMP08670 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VIMP08670 AL020997.2-201ENST00000602607 184 ntBASIC3.01□□□□□ -1.93
VIMP08670 AC008277.2-201ENST00000605196 797 ntBASIC3.01□□□□□ -1.93
VIMP08670 AC121334.2-201ENST00000605387 271 ntBASIC3.01□□□□□ -1.93
VIMP08670 BX664608.1-201ENST00000610519 487 ntBASIC3.01□□□□□ -1.93
VIMP08670 AL603755.1-201ENST00000619504 163 ntBASIC3.01□□□□□ -1.93
VIMP08670 Z99129.2-201ENST00000619967 314 ntBASIC3.01□□□□□ -1.93
VIMP08670 AC002064.3-201ENST00000623448 346 ntBASIC3.01□□□□□ -1.93
VIMP08670 AC007494.3-201ENST00000624660 743 ntBASIC3.01□□□□□ -1.93
VIMP08670 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.01□□□□□ -1.93
VIMP08670 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VIMP08670 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.01□□□□□ -1.93
VIMP08670 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.01□□□□□ -1.93
VIMP08670 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.01□□□□□ -1.93
VIMP08670 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3□□□□□ -1.93
VIMP08670 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
VIMP08670 SNORD115.1-201ENST00000391109 76 ntBASIC3□□□□□ -1.93
VIMP08670 Y_RNA.625-201ENST00000411256 107 ntBASIC3□□□□□ -1.93
VIMP08670 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3□□□□□ -1.93
VIMP08670 AC092447.3-201ENST00000426027 686 ntBASIC3□□□□□ -1.93
VIMP08670 RPS6P15-201ENST00000431996 751 ntBASIC3□□□□□ -1.93
VIMP08670 AL445567.1-201ENST00000439121 144 ntBASIC3□□□□□ -1.93
VIMP08670 AC122718.1-201ENST00000439448 744 ntBASIC3□□□□□ -1.93
VIMP08670 MTND1P30-201ENST00000441241 901 ntBASIC3□□□□□ -1.93
VIMP08670 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3□□□□□ -1.93
VIMP08670 AC016696.1-201ENST00000446949 318 ntBASIC3□□□□□ -1.93
VIMP08670 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3□□□□□ -1.93
VIMP08670 MTND4LP3-201ENST00000468320 276 ntBASIC3□□□□□ -1.93
VIMP08670 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3□□□□□ -1.93
VIMP08670 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3□□□□□ -1.93
VIMP08670 RAC1P5-201ENST00000512182 576 ntBASIC3□□□□□ -1.93
VIMP08670 RNA5SP290-201ENST00000517133 127 ntBASIC3□□□□□ -1.93
VIMP08670 DUXAP2-201ENST00000519198 589 ntBASIC3□□□□□ -1.93
VIMP08670 ELOCP31-201ENST00000540463 467 ntBASIC3□□□□□ -1.93
VIMP08670 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3□□□□□ -1.93
VIMP08670 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3□□□□□ -1.93
VIMP08670 MTND3P12-201ENST00000559068 328 ntBASIC3□□□□□ -1.93
VIMP08670 AC109446.2-201ENST00000567872 497 ntBASIC3□□□□□ -1.93
VIMP08670 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VIMP08670 MIR3915-201ENST00000578518 97 ntBASIC3□□□□□ -1.93
VIMP08670 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3□□□□□ -1.93
VIMP08670 AP000787.2-201ENST00000604432 568 ntBASIC3□□□□□ -1.93
VIMP08670 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3□□□□□ -1.93
VIMP08670 AC100793.4-201ENST00000613683 429 ntBASIC3□□□□□ -1.93
VIMP08670 uc_338.12-201ENST00000616344 181 ntBASIC3□□□□□ -1.93
VIMP08670 AL355365.1-201ENST00000616480 294 ntBASIC3□□□□□ -1.93
VIMP08670 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3□□□□□ -1.93
VIMP08670 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3□□□□□ -1.93
VIMP08670 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3□□□□□ -1.93
VIMP08670 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
VIMP08670 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
VIMP08670 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3□□□□□ -1.93
VIMP08670 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
VIMP08670 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.99□□□□□ -1.93
VIMP08670 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.99□□□□□ -1.93
VIMP08670 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
VIMP08670 MIR181A2-201ENST00000384863 110 ntBASIC2.99□□□□□ -1.93
VIMP08670 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
VIMP08670 AL139095.1-201ENST00000404326 391 ntBASIC2.99□□□□□ -1.93
VIMP08670 AL139397.2-201ENST00000404529 772 ntBASIC2.99□□□□□ -1.93
VIMP08670 NDUFS5P1-201ENST00000405668 289 ntBASIC2.99□□□□□ -1.93
VIMP08670 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.99□□□□□ -1.93
VIMP08670 RPL17P12-201ENST00000413391 526 ntBASIC2.99□□□□□ -1.93
VIMP08670 AC063979.1-201ENST00000415539 377 ntBASIC2.99□□□□□ -1.93
VIMP08670 AC091390.1-201ENST00000433904 331 ntBASIC2.99□□□□□ -1.93
VIMP08670 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.99□□□□□ -1.93
VIMP08670 PDSS1P2-201ENST00000449397 678 ntBASIC2.99□□□□□ -1.93
VIMP08670 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.99□□□□□ -1.93
VIMP08670 RPL12P25-201ENST00000455592 494 ntBASIC2.99□□□□□ -1.93
VIMP08670 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.99□□□□□ -1.93
VIMP08670 AC013267.1-201ENST00000458227 267 ntBASIC2.99□□□□□ -1.93
VIMP08670 RPF2P2-201ENST00000504693 896 ntBASIC2.99□□□□□ -1.93
VIMP08670 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.99□□□□□ -1.93
VIMP08670 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.99□□□□□ -1.93
VIMP08670 AC026403.1-201ENST00000518938 295 ntBASIC2.99□□□□□ -1.93
VIMP08670 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms