Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 OR5H15-201ENST00000383696 930 ntBASIC3.13□□□□□ -1.91
SSX4O60224 RNU6-701P-201ENST00000384059 107 ntBASIC3.13□□□□□ -1.91
SSX4O60224 NDUFS5P1-201ENST00000405668 289 ntBASIC3.13□□□□□ -1.91
SSX4O60224 Z85995.1-201ENST00000415547 335 ntBASIC3.13□□□□□ -1.91
SSX4O60224 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.13□□□□□ -1.91
SSX4O60224 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.13□□□□□ -1.91
SSX4O60224 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.13□□□□□ -1.91
SSX4O60224 TRIAP1P1-201ENST00000427062 225 ntBASIC3.13□□□□□ -1.91
SSX4O60224 AL159987.2-201ENST00000432754 307 ntBASIC3.13□□□□□ -1.91
SSX4O60224 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.13□□□□□ -1.91
SSX4O60224 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.13□□□□□ -1.91
SSX4O60224 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.13□□□□□ -1.91
SSX4O60224 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.13□□□□□ -1.91
SSX4O60224 AL136380.1-201ENST00000447970 162 ntBASIC3.13□□□□□ -1.91
SSX4O60224 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.13□□□□□ -1.91
SSX4O60224 HMGN1P18-201ENST00000457642 277 ntBASIC3.13□□□□□ -1.91
SSX4O60224 SNORD105B-201ENST00000458770 79 ntBASIC3.13□□□□□ -1.91
SSX4O60224 AC021205.2-201ENST00000480069 347 ntBASIC3.13□□□□□ -1.91
SSX4O60224 AC092185.1-201ENST00000491371 97 ntBASIC3.13□□□□□ -1.91
SSX4O60224 RPL30P5-201ENST00000494923 336 ntBASIC3.13□□□□□ -1.91
SSX4O60224 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.13□□□□□ -1.91
SSX4O60224 SNORA74D-201ENST00000516404 141 ntBASIC3.13□□□□□ -1.91
SSX4O60224 SNORA64.4-201ENST00000516632 81 ntBASIC3.13□□□□□ -1.91
SSX4O60224 RNU6-1220P-201ENST00000517126 108 ntBASIC3.13□□□□□ -1.91
SSX4O60224 RN7SKP258-201ENST00000517151 304 ntBASIC3.13□□□□□ -1.91
SSX4O60224 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.13□□□□□ -1.91
SSX4O60224 AC135279.1-201ENST00000543493 504 ntBASIC3.13□□□□□ -1.91
SSX4O60224 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.13□□□□□ -1.91
SSX4O60224 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.13□□□□□ -1.91
SSX4O60224 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.13□□□□□ -1.91
SSX4O60224 MIR4474-201ENST00000579189 78 ntBASIC3.13□□□□□ -1.91
SSX4O60224 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.13□□□□□ -1.91
SSX4O60224 AC087683.1-201ENST00000591187 441 ntBASIC3.13□□□□□ -1.91
SSX4O60224 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.13□□□□□ -1.91
SSX4O60224 AC068831.7-201ENST00000616954 363 ntBASIC3.13□□□□□ -1.91
SSX4O60224 AC002076.2-201ENST00000617362 122 ntBASIC3.13□□□□□ -1.91
SSX4O60224 AL732372.2-225ENST00000642124 456 ntBASIC3.13□□□□□ -1.91
SSX4O60224 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
SSX4O60224 AL136164.4-201ENST00000625013 2135 ntBASIC3.13□□□□□ -1.91
SSX4O60224 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.12□□□□□ -1.91
SSX4O60224 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SSX4O60224 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSX4O60224 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SSX4O60224 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SSX4O60224 RNY1P12-201ENST00000364251 105 ntBASIC3.12□□□□□ -1.91
SSX4O60224 RNU4-75P-201ENST00000364621 146 ntBASIC3.12□□□□□ -1.91
SSX4O60224 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSX4O60224 RNU6-39P-201ENST00000384344 107 ntBASIC3.12□□□□□ -1.91
SSX4O60224 MIR325-201ENST00000385260 98 ntBASIC3.12□□□□□ -1.91
SSX4O60224 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSX4O60224 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
SSX4O60224 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.12□□□□□ -1.91
SSX4O60224 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.12□□□□□ -1.91
SSX4O60224 MTND3P17-201ENST00000416968 344 ntBASIC3.12□□□□□ -1.91
SSX4O60224 RAC1P6-201ENST00000423911 575 ntBASIC3.12□□□□□ -1.91
SSX4O60224 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.12□□□□□ -1.91
SSX4O60224 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.12□□□□□ -1.91
SSX4O60224 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SSX4O60224 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.12□□□□□ -1.91
SSX4O60224 USP9YP14-201ENST00000430663 563 ntBASIC3.12□□□□□ -1.91
SSX4O60224 SNRPEP4-201ENST00000435815 279 ntBASIC3.12□□□□□ -1.91
SSX4O60224 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.12□□□□□ -1.91
SSX4O60224 HMGN2P20-201ENST00000437531 273 ntBASIC3.12□□□□□ -1.91
SSX4O60224 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.12□□□□□ -1.91
SSX4O60224 RPL21P10-201ENST00000463521 490 ntBASIC3.12□□□□□ -1.91
SSX4O60224 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.12□□□□□ -1.91
SSX4O60224 RPL32P34-201ENST00000486380 400 ntBASIC3.12□□□□□ -1.91
SSX4O60224 AL358832.1-201ENST00000497800 389 ntBASIC3.12□□□□□ -1.91
SSX4O60224 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.12□□□□□ -1.91
SSX4O60224 MTND4LP22-201ENST00000508209 276 ntBASIC3.12□□□□□ -1.91
SSX4O60224 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.12□□□□□ -1.91
SSX4O60224 RN7SKP298-201ENST00000515950 94 ntBASIC3.12□□□□□ -1.91
SSX4O60224 RNU6-430P-201ENST00000517078 107 ntBASIC3.12□□□□□ -1.91
SSX4O60224 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.12□□□□□ -1.91
SSX4O60224 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.12□□□□□ -1.91
SSX4O60224 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.12□□□□□ -1.91
SSX4O60224 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.12□□□□□ -1.91
SSX4O60224 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.12□□□□□ -1.91
SSX4O60224 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.12□□□□□ -1.91
SSX4O60224 MIR3200-201ENST00000580767 85 ntBASIC3.12□□□□□ -1.91
SSX4O60224 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.12□□□□□ -1.91
SSX4O60224 AC245014.2-201ENST00000603689 287 ntBASIC3.12□□□□□ -1.91
SSX4O60224 AL161729.4-201ENST00000604650 476 ntBASIC3.12□□□□□ -1.91
SSX4O60224 AC246785.4-201ENST00000605374 287 ntBASIC3.12□□□□□ -1.91
SSX4O60224 RNU1-30P-201ENST00000606575 163 ntBASIC3.12□□□□□ -1.91
SSX4O60224 MIR98-201ENST00000606724 119 ntBASIC3.12□□□□□ -1.91
SSX4O60224 AC091834.1-201ENST00000614543 472 ntBASIC3.12□□□□□ -1.91
SSX4O60224 AC072046.2-201ENST00000618366 268 ntBASIC3.12□□□□□ -1.91
SSX4O60224 AC027309.3-201ENST00000623419 351 ntBASIC3.12□□□□□ -1.91
SSX4O60224 FRG1KP-201ENST00000623592 341 ntBASIC3.12□□□□□ -1.91
SSX4O60224 AC032011.1-201ENST00000611703 1549 ntBASIC3.12□□□□□ -1.91
SSX4O60224 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSX4O60224 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.12□□□□□ -1.91
SSX4O60224 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
SSX4O60224 CR848007.1-201ENST00000442354 1699 ntBASIC3.11□□□□□ -1.91
SSX4O60224 AC007785.2-201ENST00000598627 1916 ntBASIC3.11□□□□□ -1.91
SSX4O60224 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SSX4O60224 HSPE1P11-201ENST00000339579 310 ntBASIC3.11□□□□□ -1.91
SSX4O60224 RNU6-623P-201ENST00000363143 105 ntBASIC3.11□□□□□ -1.91
SSX4O60224 RNU6-169P-201ENST00000365336 107 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms