Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SGCEO43556 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.02□□□□□ -2.09
SGCEO43556 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SGCEO43556 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SGCEO43556 KPNA2P1-201ENST00000458289 1591 ntBASIC2.02□□□□□ -2.09
SGCEO43556 MTND4P1-201ENST00000457501 1466 ntBASIC2.01□□□□□ -2.09
SGCEO43556 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
SGCEO43556 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SGCEO43556 PTGES3P2-201ENST00000407942 482 ntBASIC2.01□□□□□ -2.09
SGCEO43556 AL450338.1-201ENST00000407987 512 ntBASIC2.01□□□□□ -2.09
SGCEO43556 USP9YP19-201ENST00000412165 485 ntBASIC2.01□□□□□ -2.09
SGCEO43556 AC009963.1-201ENST00000417265 157 ntBASIC2.01□□□□□ -2.09
SGCEO43556 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.01□□□□□ -2.09
SGCEO43556 USP9YP13-201ENST00000417797 480 ntBASIC2.01□□□□□ -2.09
SGCEO43556 AL139421.1-201ENST00000423010 169 ntBASIC2.01□□□□□ -2.09
SGCEO43556 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SGCEO43556 MED14P1-201ENST00000430517 648 ntBASIC2.01□□□□□ -2.09
SGCEO43556 ATP5F1P1-201ENST00000433775 569 ntBASIC2.01□□□□□ -2.09
SGCEO43556 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.01□□□□□ -2.09
SGCEO43556 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.01□□□□□ -2.09
SGCEO43556 UBE2FP3-201ENST00000436366 524 ntBASIC2.01□□□□□ -2.09
SGCEO43556 AC002381.1-201ENST00000447049 280 ntBASIC2.01□□□□□ -2.09
SGCEO43556 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.01□□□□□ -2.09
SGCEO43556 AC098591.2-201ENST00000510152 315 ntBASIC2.01□□□□□ -2.09
SGCEO43556 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.01□□□□□ -2.09
SGCEO43556 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.01□□□□□ -2.09
SGCEO43556 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC2.01□□□□□ -2.09
SGCEO43556 AL138976.2-201ENST00000563989 694 ntBASIC2.01□□□□□ -2.09
SGCEO43556 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.01□□□□□ -2.09
SGCEO43556 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.01□□□□□ -2.09
SGCEO43556 AP000403.1-201ENST00000603349 851 ntBASIC2.01□□□□□ -2.09
SGCEO43556 AC136601.2-201ENST00000604356 474 ntBASIC2.01□□□□□ -2.09
SGCEO43556 MIR6766-201ENST00000622641 72 ntBASIC2.01□□□□□ -2.09
SGCEO43556 AC120349.2-201ENST00000625002 298 ntBASIC2.01□□□□□ -2.09
SGCEO43556 AC243829.7-201ENST00000633081 225 ntBASIC2.01□□□□□ -2.09
SGCEO43556 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SGCEO43556 CENPCP1-201ENST00000533085 2578 ntBASIC2□□□□□ -2.09
SGCEO43556 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SGCEO43556 RNA5SP37-201ENST00000365420 130 ntBASIC2□□□□□ -2.09
SGCEO43556 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
SGCEO43556 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
SGCEO43556 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SGCEO43556 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
SGCEO43556 MIR634-201ENST00000385208 97 ntBASIC2□□□□□ -2.09
SGCEO43556 SNORD65.1-201ENST00000390889 71 ntBASIC2□□□□□ -2.09
SGCEO43556 RPL22P22-201ENST00000395439 379 ntBASIC2□□□□□ -2.09
SGCEO43556 DHFRP6-201ENST00000401776 268 ntBASIC2□□□□□ -2.09
SGCEO43556 SNORD23.1-201ENST00000408212 104 ntBASIC2□□□□□ -2.09
SGCEO43556 AC107081.1-201ENST00000414975 361 ntBASIC2□□□□□ -2.09
SGCEO43556 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2□□□□□ -2.09
SGCEO43556 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2□□□□□ -2.09
SGCEO43556 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2□□□□□ -2.09
SGCEO43556 MTCO1P3-201ENST00000429327 192 ntBASIC2□□□□□ -2.09
SGCEO43556 AC236972.1-201ENST00000433225 199 ntBASIC2□□□□□ -2.09
SGCEO43556 OFD1P7Y-201ENST00000454643 1155 ntBASIC2□□□□□ -2.09
SGCEO43556 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2□□□□□ -2.09
SGCEO43556 SNORD121B-201ENST00000458838 81 ntBASIC2□□□□□ -2.09
SGCEO43556 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2□□□□□ -2.09
SGCEO43556 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2□□□□□ -2.09
SGCEO43556 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2□□□□□ -2.09
SGCEO43556 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2□□□□□ -2.09
SGCEO43556 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2□□□□□ -2.09
SGCEO43556 AC093677.1-201ENST00000514414 678 ntBASIC2□□□□□ -2.09
SGCEO43556 MIR514B-201ENST00000516774 80 ntBASIC2□□□□□ -2.09
SGCEO43556 SCARNA3-201ENST00000517097 143 ntBASIC2□□□□□ -2.09
SGCEO43556 NRON-201ENST00000517270 370 ntBASIC2□□□□□ -2.09
SGCEO43556 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2□□□□□ -2.09
SGCEO43556 MTCYBP20-201ENST00000524239 1129 ntBASIC2□□□□□ -2.09
SGCEO43556 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2□□□□□ -2.09
SGCEO43556 AC087276.1-201ENST00000529659 480 ntBASIC2□□□□□ -2.09
SGCEO43556 AC010186.2-204ENST00000537668 439 ntBASIC2□□□□□ -2.09
SGCEO43556 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2□□□□□ -2.09
SGCEO43556 AC007151.1-201ENST00000572774 483 ntBASIC2□□□□□ -2.09
SGCEO43556 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2□□□□□ -2.09
SGCEO43556 AC002984.1-201ENST00000591692 448 ntBASIC2□□□□□ -2.09
SGCEO43556 AC007938.3-201ENST00000604965 623 ntBASIC2□□□□□ -2.09
SGCEO43556 AL450336.1-201ENST00000605180 586 ntBASIC2□□□□□ -2.09
SGCEO43556 AC243773.3-201ENST00000613270 256 ntBASIC2□□□□□ -2.09
SGCEO43556 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2□□□□□ -2.09
SGCEO43556 AP002791.1-201ENST00000623291 381 ntBASIC2□□□□□ -2.09
SGCEO43556 AL359851.1-201ENST00000569460 4997 ntBASIC2□□□□□ -2.09
SGCEO43556 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SGCEO43556 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SGCEO43556 RNU6-1078P-201ENST00000364522 103 ntBASIC1.99□□□□□ -2.09
SGCEO43556 RNU6-707P-201ENST00000364647 95 ntBASIC1.99□□□□□ -2.09
SGCEO43556 RNU6-637P-201ENST00000384050 107 ntBASIC1.99□□□□□ -2.09
SGCEO43556 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SGCEO43556 NPM1P11-201ENST00000417106 855 ntBASIC1.99□□□□□ -2.09
SGCEO43556 EIF4EP4-201ENST00000424916 578 ntBASIC1.99□□□□□ -2.09
SGCEO43556 AC092634.2-201ENST00000428146 1010 ntBASIC1.99□□□□□ -2.09
SGCEO43556 ZYG11AP1-201ENST00000430329 837 ntBASIC1.99□□□□□ -2.09
SGCEO43556 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SGCEO43556 MTND4P6-201ENST00000438297 472 ntBASIC1.99□□□□□ -2.09
SGCEO43556 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.99□□□□□ -2.09
SGCEO43556 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.99□□□□□ -2.09
SGCEO43556 RPL12P25-201ENST00000455592 494 ntBASIC1.99□□□□□ -2.09
SGCEO43556 ATG12P2-201ENST00000456830 416 ntBASIC1.99□□□□□ -2.09
SGCEO43556 RPS29P20-201ENST00000489592 171 ntBASIC1.99□□□□□ -2.09
SGCEO43556 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.99□□□□□ -2.09
SGCEO43556 CYB5AP5-201ENST00000549779 389 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms