Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.51□□□□□ -2.01
AP3B1O00203 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.51□□□□□ -2.01
AP3B1O00203 SNRPEP9-201ENST00000436794 238 ntBASIC2.51□□□□□ -2.01
AP3B1O00203 IFNA11P-201ENST00000446352 526 ntBASIC2.51□□□□□ -2.01
AP3B1O00203 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
AP3B1O00203 AC013267.1-201ENST00000458227 267 ntBASIC2.51□□□□□ -2.01
AP3B1O00203 RPL23AP45-201ENST00000476406 468 ntBASIC2.51□□□□□ -2.01
AP3B1O00203 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
AP3B1O00203 AC079203.1-201ENST00000487972 404 ntBASIC2.51□□□□□ -2.01
AP3B1O00203 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.51□□□□□ -2.01
AP3B1O00203 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.51□□□□□ -2.01
AP3B1O00203 SCARNA3-201ENST00000517097 143 ntBASIC2.51□□□□□ -2.01
AP3B1O00203 RNA5SP402-201ENST00000517148 110 ntBASIC2.51□□□□□ -2.01
AP3B1O00203 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.51□□□□□ -2.01
AP3B1O00203 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.51□□□□□ -2.01
AP3B1O00203 AP005902.1-201ENST00000521358 186 ntBASIC2.51□□□□□ -2.01
AP3B1O00203 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.51□□□□□ -2.01
AP3B1O00203 AC010186.2-204ENST00000537668 439 ntBASIC2.51□□□□□ -2.01
AP3B1O00203 AC121758.2-201ENST00000553271 193 ntBASIC2.51□□□□□ -2.01
AP3B1O00203 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.51□□□□□ -2.01
AP3B1O00203 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.51□□□□□ -2.01
AP3B1O00203 OR2AS2P-201ENST00000606902 342 ntBASIC2.51□□□□□ -2.01
AP3B1O00203 AC007349.4-201ENST00000608114 532 ntBASIC2.51□□□□□ -2.01
AP3B1O00203 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.51□□□□□ -2.01
AP3B1O00203 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
AP3B1O00203 AC131280.1-202ENST00000624067 4211 ntBASIC2.5□□□□□ -2.01
AP3B1O00203 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.5□□□□□ -2.01
AP3B1O00203 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
AP3B1O00203 SNORA80E-201ENST00000384744 137 ntBASIC2.5□□□□□ -2.01
AP3B1O00203 AL590084.1-201ENST00000407885 387 ntBASIC2.5□□□□□ -2.01
AP3B1O00203 COTL1P1-201ENST00000422309 375 ntBASIC2.5□□□□□ -2.01
AP3B1O00203 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.5□□□□□ -2.01
AP3B1O00203 ARL5AP4-201ENST00000430731 512 ntBASIC2.5□□□□□ -2.01
AP3B1O00203 AC236972.1-201ENST00000433225 199 ntBASIC2.5□□□□□ -2.01
AP3B1O00203 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.5□□□□□ -2.01
AP3B1O00203 MTATP6P7-201ENST00000453315 681 ntBASIC2.5□□□□□ -2.01
AP3B1O00203 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.5□□□□□ -2.01
AP3B1O00203 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.5□□□□□ -2.01
AP3B1O00203 AC110760.3-202ENST00000515177 371 ntBASIC2.5□□□□□ -2.01
AP3B1O00203 RN7SKP24-201ENST00000515888 284 ntBASIC2.5□□□□□ -2.01
AP3B1O00203 AC005832.3-201ENST00000537929 631 ntBASIC2.5□□□□□ -2.01
AP3B1O00203 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.5□□□□□ -2.01
AP3B1O00203 AF038458.1-201ENST00000588406 262 ntBASIC2.5□□□□□ -2.01
AP3B1O00203 BNIP3P19-201ENST00000605397 577 ntBASIC2.5□□□□□ -2.01
AP3B1O00203 MIR7106-201ENST00000612419 65 ntBASIC2.5□□□□□ -2.01
AP3B1O00203 AL589743.7-201ENST00000612637 233 ntBASIC2.5□□□□□ -2.01
AP3B1O00203 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.5□□□□□ -2.01
AP3B1O00203 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.5□□□□□ -2.01
AP3B1O00203 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.5□□□□□ -2.01
AP3B1O00203 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
AP3B1O00203 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
AP3B1O00203 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
AP3B1O00203 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.5□□□□□ -2.01
AP3B1O00203 AC092447.10-201ENST00000620607 1652 ntBASIC2.5□□□□□ -2.01
AP3B1O00203 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.49□□□□□ -2.01
AP3B1O00203 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
AP3B1O00203 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
AP3B1O00203 Y_RNA.245-201ENST00000364493 95 ntBASIC2.49□□□□□ -2.01
AP3B1O00203 MIR34A-201ENST00000385130 110 ntBASIC2.49□□□□□ -2.01
AP3B1O00203 RNA5SP184-201ENST00000411071 108 ntBASIC2.49□□□□□ -2.01
AP3B1O00203 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.49□□□□□ -2.01
AP3B1O00203 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.49□□□□□ -2.01
AP3B1O00203 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.49□□□□□ -2.01
AP3B1O00203 MTND5P14-201ENST00000441481 1267 ntBASIC2.49□□□□□ -2.01
AP3B1O00203 RPS27P27-201ENST00000498779 255 ntBASIC2.49□□□□□ -2.01
AP3B1O00203 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.49□□□□□ -2.01
AP3B1O00203 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.49□□□□□ -2.01
AP3B1O00203 AC113347.3-201ENST00000509113 148 ntBASIC2.49□□□□□ -2.01
AP3B1O00203 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.49□□□□□ -2.01
AP3B1O00203 RN7SKP132-201ENST00000516001 208 ntBASIC2.49□□□□□ -2.01
AP3B1O00203 RNU6-467P-201ENST00000517027 110 ntBASIC2.49□□□□□ -2.01
AP3B1O00203 AC007115.1-201ENST00000546853 234 ntBASIC2.49□□□□□ -2.01
AP3B1O00203 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.49□□□□□ -2.01
AP3B1O00203 AL132657.2-201ENST00000564417 358 ntBASIC2.49□□□□□ -2.01
AP3B1O00203 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.49□□□□□ -2.01
AP3B1O00203 AL512347.1-201ENST00000566420 503 ntBASIC2.49□□□□□ -2.01
AP3B1O00203 AGGF1P5-201ENST00000567900 919 ntBASIC2.49□□□□□ -2.01
AP3B1O00203 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.49□□□□□ -2.01
AP3B1O00203 AL021997.1-201ENST00000605757 193 ntBASIC2.49□□□□□ -2.01
AP3B1O00203 AC093673.2-201ENST00000609674 331 ntBASIC2.49□□□□□ -2.01
AP3B1O00203 AC009237.15-201ENST00000610252 501 ntBASIC2.49□□□□□ -2.01
AP3B1O00203 AC010678.1-201ENST00000614118 713 ntBASIC2.49□□□□□ -2.01
AP3B1O00203 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.49□□□□□ -2.01
AP3B1O00203 AC126544.2-201ENST00000625174 749 ntBASIC2.49□□□□□ -2.01
AP3B1O00203 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.49□□□□□ -2.01
AP3B1O00203 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
AP3B1O00203 AC016717.2-201ENST00000609089 5141 ntBASIC2.49□□□□□ -2.01
AP3B1O00203 AC004944.1-201ENST00000517807 3059 ntBASIC2.48□□□□□ -2.01
AP3B1O00203 MTND5P29-201ENST00000458676 1807 ntBASIC2.48□□□□□ -2.01
AP3B1O00203 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
AP3B1O00203 AL359511.1-201ENST00000402970 211 ntBASIC2.48□□□□□ -2.01
AP3B1O00203 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.48□□□□□ -2.01
AP3B1O00203 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.48□□□□□ -2.01
AP3B1O00203 MTCO2P25-201ENST00000447065 681 ntBASIC2.48□□□□□ -2.01
AP3B1O00203 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.48□□□□□ -2.01
AP3B1O00203 AC128713.1-201ENST00000471495 306 ntBASIC2.48□□□□□ -2.01
AP3B1O00203 RPS27AP10-201ENST00000496103 208 ntBASIC2.48□□□□□ -2.01
AP3B1O00203 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.48□□□□□ -2.01
AP3B1O00203 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.48□□□□□ -2.01
AP3B1O00203 PRELID2P1-201ENST00000552837 301 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms