Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 RNU1-15P-201ENST00000353977 144 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 RN7SKP44-201ENST00000363602 316 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 RNU6-82P-201ENST00000363970 107 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 RNU1-64P-201ENST00000365443 163 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 RNU6-946P-201ENST00000383878 107 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 RNU6-701P-201ENST00000384059 107 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 SNORA37-201ENST00000384504 129 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 MIR124-3-201ENST00000384866 87 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 RNU6-882P-201ENST00000391025 103 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 RNU6-550P-201ENST00000391057 101 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 LAP3P1-201ENST00000403648 294 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AL121834.1-202ENST00000404494 277 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 RNU4-46P-201ENST00000410818 138 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 POLHP1-201ENST00000411806 470 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AC074085.1-201ENST00000413598 418 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 RPL30P2-201ENST00000414021 291 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 CALM2P2-201ENST00000428512 440 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AC069285.2-201ENST00000440210 275 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 RPL7P43-201ENST00000478876 753 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AC090096.1-201ENST00000489168 390 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 RPS27AP13-201ENST00000498403 237 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AC099522.1-202ENST00000514718 367 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AC090136.1-201ENST00000520009 240 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 APOOP3-201ENST00000536787 586 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 OR4H12P-201ENST00000556269 907 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 CYP4A43P-201ENST00000568156 121 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AC092747.3-201ENST00000603769 301 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AL591034.3-201ENST00000605511 685 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AC124303.1-201ENST00000605703 360 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AL355802.3-201ENST00000607571 545 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 DUSP12P1-201ENST00000612874 516 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 MIR492-201ENST00000638676 116 ntBASIC4.03□□□□□ -1.76
NDC1Q9BTX1 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
NDC1Q9BTX1 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.03□□□□□ -1.77
NDC1Q9BTX1 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.77
NDC1Q9BTX1 TPTE2P4-201ENST00000258589 1605 ntBASIC4.03□□□□□ -1.77
NDC1Q9BTX1 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.02□□□□□ -1.77
NDC1Q9BTX1 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.02□□□□□ -1.77
NDC1Q9BTX1 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NDC1Q9BTX1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NDC1Q9BTX1 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
NDC1Q9BTX1 RNA5SP52-201ENST00000362448 134 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 SNORD113-7-201ENST00000363762 77 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 Y_RNA.202-201ENST00000364083 110 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 SMIM11P1-201ENST00000369586 178 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 NDUFS5P1-201ENST00000405668 289 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 MIR1179-201ENST00000408703 91 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 RPS23P10-201ENST00000416185 486 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.02□□□□□ -1.77
NDC1Q9BTX1 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.02□□□□□ -1.77
NDC1Q9BTX1 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.02□□□□□ -1.77
NDC1Q9BTX1 AC005019.1-201ENST00000436455 431 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 RPL5P30-201ENST00000465511 891 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 RPL21P93-201ENST00000480465 489 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 TRBVA-201ENST00000498804 316 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 AC025445.1-201ENST00000502728 300 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.02□□□□□ -1.77
NDC1Q9BTX1 RBBP4P6-201ENST00000508098 202 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 AC098591.2-201ENST00000510152 315 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.02□□□□□ -1.77
NDC1Q9BTX1 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.02□□□□□ -1.77
NDC1Q9BTX1 RNU6-566P-201ENST00000516790 107 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 Y_RNA.711-201ENST00000516993 102 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 IFITM8P-201ENST00000522529 394 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.02□□□□□ -1.77
NDC1Q9BTX1 RANP3-201ENST00000530970 276 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 AC069240.1-201ENST00000548774 375 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 OR11H5P-201ENST00000554039 926 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 AL163153.1-201ENST00000554223 283 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.02□□□□□ -1.77
NDC1Q9BTX1 AC106785.1-201ENST00000565935 262 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NDC1Q9BTX1 AC006116.10-201ENST00000591836 581 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 AL670379.10-201ENST00000604330 253 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 AC104662.1-201ENST00000604448 511 ntBASIC4.02□□□□□ -1.77
NDC1Q9BTX1 AL670379.9-201ENST00000605428 253 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms