Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 BX323014.1-201ENST00000412876 237 ntBASIC4.39□□□□□ -1.71
KRT40Q6A162 MTND3P8-201ENST00000412909 339 ntBASIC4.39□□□□□ -1.71
KRT40Q6A162 NDUFB4P5-201ENST00000415445 361 ntBASIC4.39□□□□□ -1.71
KRT40Q6A162 OR1AA1P-201ENST00000419597 916 ntBASIC4.39□□□□□ -1.71
KRT40Q6A162 AC024082.2-201ENST00000434771 238 ntBASIC4.39□□□□□ -1.71
KRT40Q6A162 IFNA20P-201ENST00000436840 528 ntBASIC4.39□□□□□ -1.71
KRT40Q6A162 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.39□□□□□ -1.71
KRT40Q6A162 RN7SL323P-201ENST00000494712 295 ntBASIC4.39□□□□□ -1.71
KRT40Q6A162 AC117522.3-201ENST00000507974 584 ntBASIC4.39□□□□□ -1.71
KRT40Q6A162 RNU4-49P-201ENST00000516080 140 ntBASIC4.39□□□□□ -1.71
KRT40Q6A162 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.39□□□□□ -1.71
KRT40Q6A162 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.39□□□□□ -1.71
KRT40Q6A162 MIR4716-201ENST00000579628 84 ntBASIC4.39□□□□□ -1.71
KRT40Q6A162 HMGB1P50-201ENST00000605814 607 ntBASIC4.39□□□□□ -1.71
KRT40Q6A162 AC040168.1-201ENST00000623594 991 ntBASIC4.39□□□□□ -1.71
KRT40Q6A162 AL136313.1-201ENST00000624804 202 ntBASIC4.39□□□□□ -1.71
KRT40Q6A162 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
KRT40Q6A162 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
KRT40Q6A162 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
KRT40Q6A162 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRT40Q6A162 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.39□□□□□ -1.71
KRT40Q6A162 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRT40Q6A162 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
KRT40Q6A162 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.38□□□□□ -1.71
KRT40Q6A162 MTCO1P12-201ENST00000414273 1543 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 NCAPGP1-201ENST00000505112 1814 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRT40Q6A162 AL139276.1-201ENST00000311910 1001 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 RNU6-989P-201ENST00000362756 107 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 Y_RNA.326-201ENST00000365176 113 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.38□□□□□ -1.71
KRT40Q6A162 RNU6-146P-201ENST00000384602 108 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 RNU2-62P-201ENST00000410868 191 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.38□□□□□ -1.71
KRT40Q6A162 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.38□□□□□ -1.71
KRT40Q6A162 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.38□□□□□ -1.71
KRT40Q6A162 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.38□□□□□ -1.71
KRT40Q6A162 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRT40Q6A162 RPL7L1P10-201ENST00000427790 463 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 OR2AS1P-201ENST00000427827 319 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 MED13P1-201ENST00000428342 171 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 CYCSP32-201ENST00000440548 321 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 AL121877.1-201ENST00000453704 622 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 AC108059.3-201ENST00000456388 214 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 RPS29P15-201ENST00000458329 171 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 MRPS17P3-201ENST00000465453 385 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KRT40Q6A162 AC068305.1-201ENST00000497406 726 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.38□□□□□ -1.71
KRT40Q6A162 TTC39CP1-201ENST00000512513 755 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 AC105417.1-201ENST00000514691 285 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 HIGD1AP3-201ENST00000515857 278 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 Y_RNA.665-201ENST00000516177 98 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KRT40Q6A162 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.38□□□□□ -1.71
KRT40Q6A162 AP000857.1-201ENST00000532151 543 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 AL133271.1-201ENST00000538229 291 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.38□□□□□ -1.71
KRT40Q6A162 RPL21P12-201ENST00000559810 515 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 MIR4775-201ENST00000581168 75 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.38□□□□□ -1.71
KRT40Q6A162 AC005000.2-201ENST00000605468 310 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 SNORA62.6-201ENST00000606322 83 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 MIR6715B-201ENST00000637172 77 ntBASIC4.38□□□□□ -1.71
KRT40Q6A162 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KRT40Q6A162 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KRT40Q6A162 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
KRT40Q6A162 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
KRT40Q6A162 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRT40Q6A162 ZNF734P-201ENST00000419494 1534 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
KRT40Q6A162 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRT40Q6A162 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KRT40Q6A162 HSPE1P11-201ENST00000339579 310 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 RNU6-552P-201ENST00000362869 119 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 Y_RNA.138-201ENST00000363462 102 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 SNORA62.1-201ENST00000364287 154 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 RNVU1-3-201ENST00000364313 161 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 RNU6-522P-201ENST00000364497 107 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 SNORD3H-201ENST00000384486 214 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 RNU6-903P-201ENST00000391270 109 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 SOD2P1-201ENST00000396543 562 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 RPL21P17-201ENST00000397467 475 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 MIR1302-11-201ENST00000408051 138 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 MIR1302-9-201ENST00000408365 138 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 MIR1302-10-201ENST00000408734 138 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 RNU2-36P-201ENST00000410361 191 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.37□□□□□ -1.71
KRT40Q6A162 AP000907.1-201ENST00000428428 510 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.37□□□□□ -1.71
KRT40Q6A162 ERLEC1P1-201ENST00000433806 578 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.37□□□□□ -1.71
KRT40Q6A162 NDUFS5P3-201ENST00000450668 321 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 AL118520.1-201ENST00000450770 291 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 RNU6-329P-201ENST00000459618 107 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 AC126389.1-201ENST00000477436 290 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.37□□□□□ -1.71
KRT40Q6A162 RNU4-29P-201ENST00000515943 174 ntBASIC4.37□□□□□ -1.71
KRT40Q6A162 Y_RNA.691-201ENST00000516611 103 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms