Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL6A2P12110 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL6A2P12110 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
COL6A2P12110 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL6A2P12110 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL6A2P12110 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
COL6A2P12110 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.37□□□□□ -1.71
COL6A2P12110 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.37□□□□□ -1.71
COL6A2P12110 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
COL6A2P12110 RNU6-715P-201ENST00000365204 103 ntBASIC4.37□□□□□ -1.71
COL6A2P12110 RNU6-190P-201ENST00000384154 102 ntBASIC4.37□□□□□ -1.71
COL6A2P12110 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL6A2P12110 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL6A2P12110 AC119751.6-201ENST00000416712 186 ntBASIC4.37□□□□□ -1.71
COL6A2P12110 AL132765.1-201ENST00000434165 553 ntBASIC4.37□□□□□ -1.71
COL6A2P12110 AC008264.1-201ENST00000447612 367 ntBASIC4.37□□□□□ -1.71
COL6A2P12110 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.37□□□□□ -1.71
COL6A2P12110 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.37□□□□□ -1.71
COL6A2P12110 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.37□□□□□ -1.71
COL6A2P12110 AC025445.1-201ENST00000502728 300 ntBASIC4.37□□□□□ -1.71
COL6A2P12110 AC108145.1-201ENST00000503770 153 ntBASIC4.37□□□□□ -1.71
COL6A2P12110 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.37□□□□□ -1.71
COL6A2P12110 AC008526.1-201ENST00000509149 338 ntBASIC4.37□□□□□ -1.71
COL6A2P12110 PARP4P3-201ENST00000510265 317 ntBASIC4.37□□□□□ -1.71
COL6A2P12110 AC093303.1-201ENST00000514549 295 ntBASIC4.37□□□□□ -1.71
COL6A2P12110 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.37□□□□□ -1.71
COL6A2P12110 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.37□□□□□ -1.71
COL6A2P12110 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.37□□□□□ -1.71
COL6A2P12110 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.37□□□□□ -1.71
COL6A2P12110 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.37□□□□□ -1.71
COL6A2P12110 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.37□□□□□ -1.71
COL6A2P12110 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.37□□□□□ -1.71
COL6A2P12110 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.37□□□□□ -1.71
COL6A2P12110 MIR5692C1-201ENST00000585309 91 ntBASIC4.37□□□□□ -1.71
COL6A2P12110 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.37□□□□□ -1.71
COL6A2P12110 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.37□□□□□ -1.71
COL6A2P12110 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.37□□□□□ -1.71
COL6A2P12110 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL6A2P12110 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL6A2P12110 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
COL6A2P12110 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.36□□□□□ -1.71
COL6A2P12110 PRO1804-201ENST00000623780 2050 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL6A2P12110 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
COL6A2P12110 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
COL6A2P12110 Y_RNA.216-201ENST00000364205 93 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 RNU6-593P-201ENST00000364716 112 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
COL6A2P12110 RNU6-128P-201ENST00000383976 107 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 Y_RNA.445-201ENST00000384168 102 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 MIR3074-201ENST00000384885 81 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 MIR3065-201ENST00000390137 79 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 CISD1P1-201ENST00000393907 327 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 MIR298-201ENST00000401212 88 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 MIR1911-201ENST00000410783 80 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 RNA5SP111-201ENST00000411386 101 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.36□□□□□ -1.71
COL6A2P12110 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL6A2P12110 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.36□□□□□ -1.71
COL6A2P12110 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.36□□□□□ -1.71
COL6A2P12110 FAR2P4-202ENST00000425399 584 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.36□□□□□ -1.71
COL6A2P12110 AL162591.2-201ENST00000449634 317 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.36□□□□□ -1.71
COL6A2P12110 RN7SL812P-201ENST00000493791 279 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.36□□□□□ -1.71
COL6A2P12110 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.36□□□□□ -1.71
COL6A2P12110 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.36□□□□□ -1.71
COL6A2P12110 AC022634.1-201ENST00000520765 532 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.36□□□□□ -1.71
COL6A2P12110 IFITM8P-201ENST00000522529 394 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 AC008489.1-201ENST00000524271 483 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
COL6A2P12110 CYCSP27-201ENST00000527643 293 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.36□□□□□ -1.71
COL6A2P12110 SNRPGP18-201ENST00000553000 214 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.36□□□□□ -1.71
COL6A2P12110 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.36□□□□□ -1.71
COL6A2P12110 BDH2P1-201ENST00000602288 736 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 XIAPP1-201ENST00000603162 600 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 AC006065.5-201ENST00000623427 349 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.36□□□□□ -1.71
COL6A2P12110 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL6A2P12110 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.36□□□□□ -1.71
COL6A2P12110 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 HSPA8P4-201ENST00000511877 1920 ntBASIC4.36□□□□□ -1.71
COL6A2P12110 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.36□□□□□ -1.71
COL6A2P12110 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
COL6A2P12110 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL6A2P12110 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL6A2P12110 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
COL6A2P12110 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL6A2P12110 AC009812.4-201ENST00000569134 1805 ntBASIC4.35□□□□□ -1.71
COL6A2P12110 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL6A2P12110 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
COL6A2P12110 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL6A2P12110 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL6A2P12110 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.35□□□□□ -1.71
COL6A2P12110 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.35□□□□□ -1.71
COL6A2P12110 AL139095.3-201ENST00000419672 1203 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms