Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXN1O15353 AC005668.1-201ENST00000571142 476 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 MIR5680-201ENST00000577577 84 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 AC104237.2-201ENST00000612456 443 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXN1O15353 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXN1O15353 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXN1O15353 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXN1O15353 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXN1O15353 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
FOXN1O15353 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXN1O15353 Y_RNA.202-201ENST00000364083 110 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 Y_RNA.259-201ENST00000364619 101 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 Y_RNA.315-201ENST00000365117 102 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 SNORA33.2-201ENST00000365413 134 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 RNU6-43P-201ENST00000384302 107 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 MIR92A2-201ENST00000385299 75 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 SOD2P1-201ENST00000396543 562 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 MRPL42P2-201ENST00000403169 426 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 AC009302.1-201ENST00000417147 390 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXN1O15353 MTCYBP8-201ENST00000422855 651 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXN1O15353 HMGB1P18-201ENST00000438801 619 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 RPS15AP9-201ENST00000439856 381 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 RN7SL93P-201ENST00000463035 293 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 AC084198.1-201ENST00000477747 402 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXN1O15353 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXN1O15353 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXN1O15353 AC022616.6-201ENST00000520479 119 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXN1O15353 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.32□□□□□ -1.72
FOXN1O15353 AC099489.2-201ENST00000574976 260 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 MIR3167-201ENST00000579623 85 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 MIR4742-201ENST00000581069 85 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 MIR3668-201ENST00000582138 75 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 AC020914.4-201ENST00000597690 277 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 AC006006.1-201ENST00000603082 144 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXN1O15353 AC103858.2-201ENST00000621471 543 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 AL356585.4-201ENST00000623078 1229 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 AC009161.2-201ENST00000624626 138 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXN1O15353 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
FOXN1O15353 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FOXN1O15353 NCAPGP1-201ENST00000505112 1814 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 USP8P1-201ENST00000494673 3183 ntBASIC4.32□□□□□ -1.72
FOXN1O15353 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXN1O15353 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
FOXN1O15353 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
FOXN1O15353 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
FOXN1O15353 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXN1O15353 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXN1O15353 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
FOXN1O15353 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.31□□□□□ -1.72
FOXN1O15353 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXN1O15353 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXN1O15353 NACAP2-201ENST00000318548 624 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 RNU5E-1-201ENST00000362477 120 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 RNU4-35P-201ENST00000362588 141 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 RNU6-1120P-201ENST00000362988 108 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 RNU1-18P-201ENST00000363062 164 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 Y_RNA.387-201ENST00000383918 102 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 RNU6-1151P-201ENST00000384684 107 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXN1O15353 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXN1O15353 AL136380.1-201ENST00000447970 162 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 RPL7L1P1-201ENST00000448259 785 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXN1O15353 ST13P14-201ENST00000474095 734 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 YWHAEP4-201ENST00000505390 198 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 RNU6-1170P-201ENST00000515974 106 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 RNA5SP164-201ENST00000516533 110 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 Y_RNA.691-201ENST00000516611 103 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXN1O15353 AF279873.1-201ENST00000523393 313 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
FOXN1O15353 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXN1O15353 PDCD5P1-201ENST00000543528 309 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 DNAJC8P1-201ENST00000554535 372 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.31□□□□□ -1.72
FOXN1O15353 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXN1O15353 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXN1O15353 AC078899.5-201ENST00000612475 178 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXN1O15353 AC093913.1-201ENST00000614178 329 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
FOXN1O15353 AL132822.1-201ENST00000617063 513 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 LINC00901.1-201ENST00000617252 152 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 RMST_9.1-201ENST00000619945 193 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 7SK.10-201ENST00000621414 298 ntBASIC4.31□□□□□ -1.72
FOXN1O15353 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXN1O15353 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
FOXN1O15353 AC066616.2-201ENST00000559334 1481 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXN1O15353 AP002907.1-201ENST00000606361 1430 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXN1O15353 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXN1O15353 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms