Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RN7SKP202-201ENST00000410439 330 ntBASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 Y_RNA.599-201ENST00000410489 109 ntBASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 CYCSP19-201ENST00000411715 316 ntBASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 ZNF863P-201ENST00000426746 417 ntBASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 GPM6BP2-201ENST00000432046 144 ntBASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 GPM6BP1-201ENST00000446387 144 ntBASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 AC006445.2-201ENST00000510061 472 ntBASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 RNA5SP503-201ENST00000517047 117 ntBASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 MIR5685-201ENST00000579080 79 ntBASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 MIR4474-201ENST00000579189 78 ntBASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 MIR1254-2-201ENST00000579553 63 ntBASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 AC004492.1-201ENST00000607036 742 ntBASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 AC103858.2-201ENST00000621471 543 ntBASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 AL354798.1-201ENST00000622505 329 ntBASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 AL359693.1-201ENST00000614959 2407 ntBASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 MRPL50P2-201ENST00000416821 482 ntBASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 AC012498.1-201ENST00000424037 437 ntBASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 RPS15AP9-201ENST00000439856 381 ntBASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 DPPA3P1-201ENST00000448050 469 ntBASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 AC006512.1-201ENST00000468816 291 ntBASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 AC009646.1-201ENST00000510455 318 ntBASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 AC105417.1-201ENST00000514691 285 ntBASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 Y_RNA.689-201ENST00000516589 107 ntBASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 RNA5SP471-201ENST00000516971 106 ntBASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 TPRKBP2-201ENST00000565969 475 ntBASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 AC025946.2-201ENST00000603398 234 ntBASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 AL158032.1-201ENST00000605401 106 ntBASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 AL157786.1-207ENST00000627771 695 ntBASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 IPO8P1-201ENST00000455509 3109 ntBASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
COL4A3BPQ9Y5P4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 RNU6-512P-201ENST00000364438 103 ntBASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 RNU6-517P-201ENST00000384362 110 ntBASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 CALM2P3-201ENST00000400429 449 ntBASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 AL139397.2-201ENST00000404529 772 ntBASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 RN7SKP27-201ENST00000410684 333 ntBASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 ATP5HP2-201ENST00000433885 485 ntBASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 HSPD1P21-201ENST00000436541 245 ntBASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 RPL21P11-201ENST00000461458 483 ntBASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 AL135752.1-201ENST00000479477 471 ntBASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 RPS15AP34-201ENST00000487776 387 ntBASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 AC069499.1-201ENST00000489433 509 ntBASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 AC019235.1-201ENST00000503847 207 ntBASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 AC026726.1-201ENST00000512859 601 ntBASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 HMGB1P33-201ENST00000563485 527 ntBASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 MIR4775-201ENST00000581168 75 ntBASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 AP003465.2-201ENST00000602571 373 ntBASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 AF250324.2-201ENST00000608299 610 ntBASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 AC130324.3-201ENST00000614165 542 ntBASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 AL138880.2-201ENST00000616214 239 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms