Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 SNORA31.21-201ENST00000517180 77 ntBASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 MIR4307-201ENST00000582802 84 ntBASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 AP000403.1-201ENST00000603349 851 ntBASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 MTCYBP22-201ENST00000603788 447 ntBASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 AP000676.3-201ENST00000623299 569 ntBASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 AC110801.1-201ENST00000623590 212 ntBASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 AC091965.5-201ENST00000624785 342 ntBASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 AC092192.1-201ENST00000633154 1018 ntBASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 AC006927.3-201ENST00000638789 384 ntBASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 AL513302.2-201ENST00000562313 1842 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 PABPC1P9-201ENST00000426076 1612 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 AP002088.1-201ENST00000382740 395 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 RPL17P12-201ENST00000413391 526 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 AC092047.1-201ENST00000424997 240 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 ARPC3P1-201ENST00000437218 533 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 AL162389.1-201ENST00000449233 177 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 AC010401.1-201ENST00000463867 348 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 BZW1P2-201ENST00000473537 826 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 RPS20P22-201ENST00000473700 357 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 FCF1P3-201ENST00000496394 590 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 AC114967.1-201ENST00000504890 259 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 ARL4AP2-201ENST00000507378 601 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 AC005178.1-201ENST00000508392 440 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 RNU6-232P-201ENST00000517144 64 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 AP002748.2-201ENST00000528671 348 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 MIR2682-201ENST00000580305 110 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 MIR3162-201ENST00000581818 82 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 uc_338.1-201ENST00000612113 180 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 AC122133.1-201ENST00000613964 233 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 TUG1_2.1-201ENST00000614234 87 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 ATP5A1P2-202ENST00000616464 443 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 AC008147.4-201ENST00000617570 1204 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 AC073308.1-201ENST00000623696 305 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 AC068880.5-201ENST00000624331 290 ntBASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA1Q9Y5H4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
PCDHGA1Q9Y5H4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 OR1S2-201ENST00000302592 978 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 FTLP6-201ENST00000355274 422 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 RNY4P24-201ENST00000362735 96 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 Y_RNA.97-201ENST00000363094 102 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 SNORA71.1-201ENST00000364523 117 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AL109755.1-201ENST00000401791 649 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AL513331.1-201ENST00000411908 397 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 RPS7P13-201ENST00000413955 498 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 RPS27AP14-201ENST00000422868 454 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 RPL37P21-201ENST00000435890 276 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 LARP1BP3-201ENST00000437229 869 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AL512286.1-201ENST00000439244 400 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 Z82210.1-201ENST00000440037 231 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 BMI1P1-201ENST00000445879 941 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 RNU7-23P-201ENST00000459465 62 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 KC877373.1-201ENST00000479066 408 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 RPS4XP22-201ENST00000480755 780 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AC135721.1-201ENST00000497954 479 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AC010486.2-201ENST00000505572 483 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 RNU6-56P-201ENST00000516986 93 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms