Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.89□□□□□ -2.11
SHANK2Q9UPX8 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.89□□□□□ -2.11
SHANK2Q9UPX8 NBEAP1-201ENST00000554452 979 ntBASIC1.89□□□□□ -2.11
SHANK2Q9UPX8 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.89□□□□□ -2.11
SHANK2Q9UPX8 AL161734.1-201ENST00000609720 557 ntBASIC1.89□□□□□ -2.11
SHANK2Q9UPX8 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SHANK2Q9UPX8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SHANK2Q9UPX8 AC135776.4-201ENST00000624300 1904 ntBASIC1.89□□□□□ -2.11
SHANK2Q9UPX8 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.89□□□□□ -2.11
SHANK2Q9UPX8 AL355497.1-201ENST00000406262 551 ntBASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 AL591034.1-201ENST00000407447 340 ntBASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 SNRPFP3-201ENST00000457792 225 ntBASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 MTCO3P35-201ENST00000485582 781 ntBASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 AC093801.2-201ENST00000503966 1050 ntBASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 CDC42P4-201ENST00000510507 563 ntBASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 DUXAP5-201ENST00000529668 529 ntBASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 AC084373.1-201ENST00000603311 235 ntBASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 AL713998.2-201ENST00000604538 1198 ntBASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 AC008083.4-201ENST00000615076 444 ntBASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 AC116563.2-201ENST00000624751 535 ntBASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 MTND5P10-201ENST00000603719 1809 ntBASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 AP001350.1-201ENST00000601906 1524 ntBASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 RNA5SP139-201ENST00000364340 117 ntBASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 MIR758-201ENST00000390227 88 ntBASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 RNU6-516P-201ENST00000411381 104 ntBASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 MTATP6P4-201ENST00000427725 675 ntBASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 CR383656.8-201ENST00000549046 145 ntBASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 MIR5000-201ENST00000577717 103 ntBASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 MKKS-204ENST00000639674 192 ntBASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 DDX43P2-201ENST00000604753 1354 ntBASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 AC138915.1-201ENST00000565427 1685 ntBASIC1.88□□□□□ -2.11
SHANK2Q9UPX8 RNU6-50P-201ENST00000362356 103 ntBASIC1.87□□□□□ -2.11
SHANK2Q9UPX8 MIR524-201ENST00000385242 87 ntBASIC1.87□□□□□ -2.11
SHANK2Q9UPX8 HMGN2P30-201ENST00000423237 256 ntBASIC1.87□□□□□ -2.11
SHANK2Q9UPX8 UBE2V1P6-201ENST00000430840 422 ntBASIC1.87□□□□□ -2.11
SHANK2Q9UPX8 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.87□□□□□ -2.11
SHANK2Q9UPX8 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.87□□□□□ -2.11
SHANK2Q9UPX8 BMI1P1-201ENST00000445879 941 ntBASIC1.87□□□□□ -2.11
SHANK2Q9UPX8 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.87□□□□□ -2.11
SHANK2Q9UPX8 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.87□□□□□ -2.11
SHANK2Q9UPX8 AC010301.1-201ENST00000473936 355 ntBASIC1.87□□□□□ -2.11
SHANK2Q9UPX8 RPL7P18-201ENST00000478965 734 ntBASIC1.87□□□□□ -2.11
SHANK2Q9UPX8 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.87□□□□□ -2.11
SHANK2Q9UPX8 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.87□□□□□ -2.11
SHANK2Q9UPX8 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.87□□□□□ -2.11
SHANK2Q9UPX8 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.87□□□□□ -2.11
SHANK2Q9UPX8 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.87□□□□□ -2.11
SHANK2Q9UPX8 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SHANK2Q9UPX8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
SHANK2Q9UPX8 RPL7P27-201ENST00000403775 720 ntBASIC1.86□□□□□ -2.11
SHANK2Q9UPX8 ZNF90P2-204ENST00000419323 1075 ntBASIC1.86□□□□□ -2.11
SHANK2Q9UPX8 TPMTP4-201ENST00000450749 678 ntBASIC1.86□□□□□ -2.11
SHANK2Q9UPX8 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.86□□□□□ -2.11
SHANK2Q9UPX8 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.86□□□□□ -2.11
SHANK2Q9UPX8 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.86□□□□□ -2.11
SHANK2Q9UPX8 AC109635.4-202ENST00000531666 412 ntBASIC1.86□□□□□ -2.11
SHANK2Q9UPX8 AC025423.2-201ENST00000537570 439 ntBASIC1.86□□□□□ -2.11
SHANK2Q9UPX8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.86□□□□□ -2.11
SHANK2Q9UPX8 AC010809.3-201ENST00000621310 641 ntBASIC1.86□□□□□ -2.11
SHANK2Q9UPX8 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.86□□□□□ -2.11
SHANK2Q9UPX8 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.86□□□□□ -2.11
SHANK2Q9UPX8 AC074117.2-201ENST00000417130 397 ntBASIC1.85□□□□□ -2.11
SHANK2Q9UPX8 AC093716.1-201ENST00000435923 377 ntBASIC1.85□□□□□ -2.11
SHANK2Q9UPX8 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.85□□□□□ -2.11
SHANK2Q9UPX8 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.85□□□□□ -2.11
SHANK2Q9UPX8 MTCYBP35-201ENST00000503630 1137 ntBASIC1.85□□□□□ -2.11
SHANK2Q9UPX8 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.85□□□□□ -2.11
SHANK2Q9UPX8 AP003117.1-201ENST00000602771 554 ntBASIC1.85□□□□□ -2.11
SHANK2Q9UPX8 AC073413.2-201ENST00000604332 360 ntBASIC1.85□□□□□ -2.11
SHANK2Q9UPX8 AL133507.1-201ENST00000605269 557 ntBASIC1.85□□□□□ -2.11
SHANK2Q9UPX8 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SHANK2Q9UPX8 MTND4P27-201ENST00000450813 1354 ntBASIC1.84□□□□□ -2.11
SHANK2Q9UPX8 RNU1-133P-201ENST00000364867 167 ntBASIC1.84□□□□□ -2.11
SHANK2Q9UPX8 AL033519.2-201ENST00000403958 392 ntBASIC1.84□□□□□ -2.11
SHANK2Q9UPX8 MTND5P25-201ENST00000430499 799 ntBASIC1.84□□□□□ -2.11
SHANK2Q9UPX8 AL513343.1-201ENST00000451818 792 ntBASIC1.84□□□□□ -2.11
SHANK2Q9UPX8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.84□□□□□ -2.11
SHANK2Q9UPX8 HMGB1P38-201ENST00000490557 577 ntBASIC1.84□□□□□ -2.11
SHANK2Q9UPX8 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.84□□□□□ -2.11
SHANK2Q9UPX8 RNU6-1073P-201ENST00000517182 106 ntBASIC1.84□□□□□ -2.11
SHANK2Q9UPX8 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.84□□□□□ -2.11
SHANK2Q9UPX8 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.84□□□□□ -2.11
SHANK2Q9UPX8 AC023825.1-201ENST00000566704 1030 ntBASIC1.84□□□□□ -2.11
SHANK2Q9UPX8 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC1.84□□□□□ -2.11
SHANK2Q9UPX8 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SHANK2Q9UPX8 MTND4P11-201ENST00000417020 1058 ntBASIC1.83□□□□□ -2.12
SHANK2Q9UPX8 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms