Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 RNVU1-3-201ENST00000364313 161 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 Y_RNA.455-201ENST00000384230 98 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 Y_RNA.496-201ENST00000384444 101 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 SNORA70E-201ENST00000384492 135 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 MIR19A-201ENST00000384878 82 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 RNA5SP372-201ENST00000390836 115 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 Y_RNA.645-201ENST00000391229 102 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 MIR1250-201ENST00000408098 113 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 AC080125.1-201ENST00000414888 684 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 AC008267.5-201ENST00000424928 265 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 AC093151.1-201ENST00000427711 313 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 OR2AS1P-201ENST00000427827 319 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 RPL23AP46-201ENST00000438548 490 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 AL031584.1-201ENST00000447169 754 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 PLGLA-201ENST00000465668 449 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 AC093767.1-201ENST00000504523 156 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 AC079140.5-201ENST00000507882 310 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 AC097473.1-201ENST00000508142 408 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 AL606490.9-201ENST00000603331 271 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 AC104695.3-201ENST00000604052 296 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 AC025588.3-201ENST00000604182 274 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 DUSP12P1-201ENST00000612874 516 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 AC107871.2-201ENST00000612894 502 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 AC000123.3-201ENST00000624029 4975 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 AC106871.1-201ENST00000568324 3102 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 SNORA71.3-201ENST00000362582 128 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 RNU6-511P-201ENST00000363496 107 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 SNORD116-11-201ENST00000383882 92 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 RNU6-641P-201ENST00000384006 107 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 SNORA75B-201ENST00000384053 137 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 MIR921-201ENST00000401133 56 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 RPL7P10-201ENST00000417407 739 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 AC068533.1-201ENST00000418542 415 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 AL133547.1-201ENST00000448546 220 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 AC004801.2-202ENST00000463559 283 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 AC015911.1-201ENST00000495111 156 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 HSPE1P5-201ENST00000561489 272 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 MIR5685-201ENST00000579080 79 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 AL160290.3-201ENST00000604869 165 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 PLCE1P1-201ENST00000622094 305 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 AC007546.2-201ENST00000623996 360 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 AC092608.2-201ENST00000624427 218 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 BMS1P21-201ENST00000634565 365 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
CNKSR3Q6P9H4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNKSR3Q6P9H4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNKSR3Q6P9H4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.6□□□□□ -1.67
CNKSR3Q6P9H4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.6□□□□□ -1.67
CNKSR3Q6P9H4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNKSR3Q6P9H4 AL672167.1-205ENST00000641112 3080 ntBASIC4.6□□□□□ -1.67
CNKSR3Q6P9H4 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNKSR3Q6P9H4 Z73965.1-201ENST00000623412 2297 ntBASIC4.6□□□□□ -1.67
CNKSR3Q6P9H4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms