Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 RPL7P36-201ENST00000444633 681 ntBASIC2.53□□□□□ -2
RAB40BQ12829 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.53□□□□□ -2
RAB40BQ12829 MRPL50P4-201ENST00000446432 475 ntBASIC2.53□□□□□ -2
RAB40BQ12829 ELOCP30-201ENST00000447108 299 ntBASIC2.53□□□□□ -2
RAB40BQ12829 ST13P20-201ENST00000447996 1065 ntBASIC2.53□□□□□ -2
RAB40BQ12829 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.53□□□□□ -2
RAB40BQ12829 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.53□□□□□ -2
RAB40BQ12829 RNU7-59P-201ENST00000459101 61 ntBASIC2.53□□□□□ -2
RAB40BQ12829 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.53□□□□□ -2
RAB40BQ12829 AC138853.1-201ENST00000503549 823 ntBASIC2.53□□□□□ -2
RAB40BQ12829 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.53□□□□□ -2
RAB40BQ12829 AP003461.1-201ENST00000528866 78 ntBASIC2.53□□□□□ -2
RAB40BQ12829 AP000907.2-201ENST00000530827 353 ntBASIC2.53□□□□□ -2
RAB40BQ12829 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.53□□□□□ -2
RAB40BQ12829 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.53□□□□□ -2
RAB40BQ12829 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.53□□□□□ -2
RAB40BQ12829 AL157394.1-201ENST00000562983 1224 ntBASIC2.53□□□□□ -2
RAB40BQ12829 MIR5680-201ENST00000577577 84 ntBASIC2.53□□□□□ -2
RAB40BQ12829 AL161729.4-201ENST00000604650 476 ntBASIC2.53□□□□□ -2
RAB40BQ12829 AL136363.1-201ENST00000605349 337 ntBASIC2.53□□□□□ -2
RAB40BQ12829 AC096577.2-201ENST00000611455 153 ntBASIC2.53□□□□□ -2
RAB40BQ12829 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RAB40BQ12829 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.53□□□□□ -2
RAB40BQ12829 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.53□□□□□ -2
RAB40BQ12829 AC004852.3-201ENST00000614131 326 ntBASIC2.53□□□□□ -2
RAB40BQ12829 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.53□□□□□ -2
RAB40BQ12829 AL031667.3-201ENST00000620124 655 ntBASIC2.53□□□□□ -2
RAB40BQ12829 AC012150.2-201ENST00000621300 544 ntBASIC2.53□□□□□ -2
RAB40BQ12829 AC091965.5-201ENST00000624785 342 ntBASIC2.53□□□□□ -2
RAB40BQ12829 AC097655.1-201ENST00000635075 318 ntBASIC2.53□□□□□ -2
RAB40BQ12829 MTND1P37-201ENST00000636562 264 ntBASIC2.53□□□□□ -2
RAB40BQ12829 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
RAB40BQ12829 AP003122.5-201ENST00000527668 3766 ntBASIC2.53□□□□□ -2.01
RAB40BQ12829 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RAB40BQ12829 AC096644.4-201ENST00000563417 2912 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.52□□□□□ -2.01
RAB40BQ12829 RNU6-1214P-201ENST00000363650 109 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 SNORA71.1-201ENST00000364523 117 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RAB40BQ12829 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.52□□□□□ -2.01
RAB40BQ12829 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.52□□□□□ -2.01
RAB40BQ12829 ATG3P1-201ENST00000419507 911 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.52□□□□□ -2.01
RAB40BQ12829 ZNF863P-201ENST00000426746 417 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.52□□□□□ -2.01
RAB40BQ12829 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.52□□□□□ -2.01
RAB40BQ12829 USP12PX-201ENST00000432383 1057 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.52□□□□□ -2.01
RAB40BQ12829 LARP1BP3-201ENST00000437229 869 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 AL714022.1-201ENST00000439897 151 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.52□□□□□ -2.01
RAB40BQ12829 snoU13.22-201ENST00000459428 104 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 AC010631.1-201ENST00000474150 156 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 AC116337.2-201ENST00000477662 156 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 AC055855.1-201ENST00000489563 579 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.52□□□□□ -2.01
RAB40BQ12829 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.52□□□□□ -2.01
RAB40BQ12829 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.52□□□□□ -2.01
RAB40BQ12829 ATP5F1P5-201ENST00000526403 760 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.52□□□□□ -2.01
RAB40BQ12829 AC004486.1-201ENST00000546846 233 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 MTND1P24-201ENST00000552175 861 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.52□□□□□ -2.01
RAB40BQ12829 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.52□□□□□ -2.01
RAB40BQ12829 MIR3670-2-201ENST00000582974 65 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 MIR3670-1-201ENST00000584160 65 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 MIR3670-3-201ENST00000584855 65 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.52□□□□□ -2.01
RAB40BQ12829 AC022022.2-201ENST00000602989 360 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 AP000811.1-201ENST00000603803 651 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 MIR3670-4-201ENST00000612260 65 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 AC090617.7-201ENST00000623952 126 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 AC068880.5-201ENST00000624331 290 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.52□□□□□ -2.01
RAB40BQ12829 Z82195.2-201ENST00000612348 18351 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 AC006378.2-201ENST00000623178 2476 ntBASIC2.52□□□□□ -2.01
RAB40BQ12829 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RAB40BQ12829 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
RAB40BQ12829 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
RAB40BQ12829 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.51□□□□□ -2.01
RAB40BQ12829 MIR208A-201ENST00000362287 71 ntBASIC2.51□□□□□ -2.01
RAB40BQ12829 RNU6-217P-201ENST00000384164 104 ntBASIC2.51□□□□□ -2.01
RAB40BQ12829 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RAB40BQ12829 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.51□□□□□ -2.01
RAB40BQ12829 VPS26BP1-201ENST00000417155 755 ntBASIC2.51□□□□□ -2.01
RAB40BQ12829 AC098592.1-201ENST00000419352 333 ntBASIC2.51□□□□□ -2.01
RAB40BQ12829 HMGN2P30-201ENST00000423237 256 ntBASIC2.51□□□□□ -2.01
RAB40BQ12829 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.51□□□□□ -2.01
RAB40BQ12829 AC005300.1-201ENST00000428401 373 ntBASIC2.51□□□□□ -2.01
RAB40BQ12829 AC104332.2-201ENST00000429959 156 ntBASIC2.51□□□□□ -2.01
RAB40BQ12829 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.51□□□□□ -2.01
RAB40BQ12829 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.51□□□□□ -2.01
RAB40BQ12829 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.51□□□□□ -2.01
RAB40BQ12829 RNU7-23P-201ENST00000459465 62 ntBASIC2.51□□□□□ -2.01
RAB40BQ12829 AC072039.1-201ENST00000477611 581 ntBASIC2.51□□□□□ -2.01
RAB40BQ12829 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.51□□□□□ -2.01
RAB40BQ12829 DSTNP2-201ENST00000504533 515 ntBASIC2.51□□□□□ -2.01
RAB40BQ12829 ARL4AP2-201ENST00000507378 601 ntBASIC2.51□□□□□ -2.01
RAB40BQ12829 AC117522.3-201ENST00000507974 584 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms