Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AL603755.1-201ENST00000619504 163 ntBASIC2.92□□□□□ -1.94
TNFRSF4P43489 AL158801.5-201ENST00000623123 465 ntBASIC2.92□□□□□ -1.94
TNFRSF4P43489 AC079248.2-201ENST00000623779 326 ntBASIC2.92□□□□□ -1.94
TNFRSF4P43489 AC068057.2-201ENST00000624047 895 ntBASIC2.92□□□□□ -1.94
TNFRSF4P43489 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.92□□□□□ -1.94
TNFRSF4P43489 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.92□□□□□ -1.94
TNFRSF4P43489 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
TNFRSF4P43489 AC103988.1-201ENST00000566382 2177 ntBASIC2.92□□□□□ -1.94
TNFRSF4P43489 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
TNFRSF4P43489 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
TNFRSF4P43489 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
TNFRSF4P43489 Y_RNA.302-201ENST00000364997 102 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
TNFRSF4P43489 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
TNFRSF4P43489 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.91□□□□□ -1.94
TNFRSF4P43489 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.91□□□□□ -1.94
TNFRSF4P43489 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.91□□□□□ -1.94
TNFRSF4P43489 AL365203.2-201ENST00000423444 196 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.91□□□□□ -1.94
TNFRSF4P43489 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.91□□□□□ -1.94
TNFRSF4P43489 TPT1P14-201ENST00000448018 505 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 RPL37P4-201ENST00000448908 268 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 AC108938.1-201ENST00000451204 136 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 AL109933.2-201ENST00000452651 260 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.91□□□□□ -1.94
TNFRSF4P43489 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.91□□□□□ -1.94
TNFRSF4P43489 OR6K1P-201ENST00000456766 971 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 AP1S2P1-201ENST00000457344 379 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 RPS20P20-201ENST00000460498 340 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 RN7SL633P-201ENST00000488974 297 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 AC117522.3-201ENST00000507974 584 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 LTV1P1-201ENST00000510683 1237 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 TTC39CP1-201ENST00000512513 755 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.91□□□□□ -1.94
TNFRSF4P43489 AP000867.2-201ENST00000532468 320 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 AC013828.2-201ENST00000532487 235 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.91□□□□□ -1.94
TNFRSF4P43489 OR4T1P-201ENST00000554933 911 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.91□□□□□ -1.94
TNFRSF4P43489 HMGB1P14-201ENST00000557424 591 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 AC090888.1-201ENST00000561335 1141 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 AC008088.1-201ENST00000580993 280 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 MIR544B-201ENST00000582372 78 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.91□□□□□ -1.94
TNFRSF4P43489 AL133393.1-201ENST00000603277 287 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 AC004223.4-201ENST00000612426 332 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 AC093838.1-201ENST00000613014 469 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 TUG1_2.1-201ENST00000614234 87 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 AF246928.1-201ENST00000623768 87 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 AP003122.6-201ENST00000623831 495 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 SNORA50A-202ENST00000629536 136 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 OR5H6-203ENST00000642105 978 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 MAPK10-322ENST00000641485 4530 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 AL136360.1-201ENST00000503377 1900 ntBASIC2.91□□□□□ -1.94
TNFRSF4P43489 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
TNFRSF4P43489 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TNFRSF4P43489 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
TNFRSF4P43489 RNU6-301P-201ENST00000384277 107 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 Y_RNA.560-201ENST00000384689 102 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 MIR9-1-201ENST00000385198 89 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 SNORA48.8-201ENST00000391324 134 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 AL360182.1-201ENST00000397433 468 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 TXNP7-201ENST00000406296 293 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TNFRSF4P43489 UBE2FP1-201ENST00000416536 447 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 SPA17P1-201ENST00000416656 452 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.9□□□□□ -1.95
TNFRSF4P43489 AL390023.1-201ENST00000428836 262 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 MTND1P20-201ENST00000430341 950 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 AL512844.2-201ENST00000433990 593 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 MTCYBP39-201ENST00000437562 491 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.9□□□□□ -1.95
TNFRSF4P43489 MTATP6P26-201ENST00000445926 662 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 SNRPGP6-201ENST00000451124 220 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFRSF4P43489 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.9□□□□□ -1.95
TNFRSF4P43489 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.9□□□□□ -1.95
TNFRSF4P43489 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFRSF4P43489 RNU6-420P-201ENST00000458780 107 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 RN7SL429P-201ENST00000479090 223 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 RN7SL432P-201ENST00000484057 298 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 RN7SL489P-201ENST00000486185 223 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 RN7SL327P-201ENST00000488659 223 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.9□□□□□ -1.95
TNFRSF4P43489 AC010486.1-201ENST00000511793 424 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.9□□□□□ -1.95
TNFRSF4P43489 MTCO1P47-201ENST00000523889 1271 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFRSF4P43489 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.9□□□□□ -1.95
TNFRSF4P43489 AC007954.1-201ENST00000554198 494 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 ACTR3BP3-201ENST00000565577 979 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.9□□□□□ -1.95
TNFRSF4P43489 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 GLUD1P4-201ENST00000590914 418 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 TPMTP1-201ENST00000592307 737 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 NRBF2P5-201ENST00000603087 788 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TNFRSF4P43489 AC103710.4-201ENST00000609301 899 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 RN7SL853P-201ENST00000617250 223 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms