Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.67□□□□□ -1.82
HOXC6P09630 PWAR6-201ENST00000552334 4618 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
HOXC6P09630 FAM35BP-202ENST00000497389 3337 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC6P09630 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC6P09630 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.66□□□□□ -1.82
HOXC6P09630 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXC6P09630 EXOC5P1-201ENST00000510543 1969 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 Y_RNA.1-201ENST00000352915 104 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 RNU6-28P-201ENST00000362378 107 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 RNU6-483P-201ENST00000384088 108 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HOXC6P09630 RNA5SP229-201ENST00000410809 99 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 AL359704.1-201ENST00000411586 781 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 AC127391.1-201ENST00000411737 98 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXC6P09630 MTCO2P5-201ENST00000422621 426 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC6P09630 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 MTCO2P11-201ENST00000431069 680 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 AC002486.1-201ENST00000435098 391 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 SNRPEP8-201ENST00000442866 260 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 DPPA3P1-201ENST00000448050 469 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXC6P09630 RPL7P47-201ENST00000497299 556 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC6P09630 AC114967.1-201ENST00000504890 259 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 PCBP2P3-201ENST00000509726 843 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXC6P09630 RNU6-507P-201ENST00000516045 100 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC6P09630 AC107954.1-201ENST00000565906 727 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 AC009101.1-201ENST00000568135 242 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 MIR3118-1-201ENST00000581787 76 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.66□□□□□ -1.82
HOXC6P09630 RPL12P50-201ENST00000603116 116 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 AL391646.1-201ENST00000603860 190 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 AC006023.1-201ENST00000603944 259 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 AC010680.4-201ENST00000605334 543 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 OR10AB1P-201ENST00000609613 938 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 AL161734.1-201ENST00000609720 557 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 AL133173.2-201ENST00000614270 90 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 ATP5A1P2-202ENST00000616464 443 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 AL359314.1-201ENST00000616913 261 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 AC009159.1-201ENST00000618386 642 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 AC006338.1-201ENST00000618453 749 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 AC022140.2-201ENST00000623500 188 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 AC010149.2-201ENST00000637608 315 ntBASIC3.66□□□□□ -1.82
HOXC6P09630 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC6P09630 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC6P09630 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXC6P09630 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HOXC6P09630 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HOXC6P09630 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.65□□□□□ -1.82
HOXC6P09630 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HOXC6P09630 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HOXC6P09630 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.65□□□□□ -1.82
HOXC6P09630 NUP58P1-201ENST00000502546 1738 ntBASIC3.65□□□□□ -1.82
HOXC6P09630 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.65□□□□□ -1.83
HOXC6P09630 RNU6-181P-201ENST00000363225 107 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 SNORA72.1-201ENST00000363485 129 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 RNU6-694P-201ENST00000364071 147 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 Y_RNA.381-201ENST00000365666 102 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 RNU6-730P-201ENST00000383954 104 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 Y_RNA.402-201ENST00000383972 102 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 Y_RNA.548-201ENST00000384656 105 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 SSXP10-201ENST00000402595 565 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 AL356421.1-201ENST00000403255 413 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 RPS3AP24-201ENST00000407896 734 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 AC138393.2-201ENST00000414742 246 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXC6P09630 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXC6P09630 MTCO1P20-201ENST00000425366 358 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 SETP5-201ENST00000437270 562 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXC6P09630 AC132479.1-201ENST00000449160 144 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXC6P09630 AC104563.1-201ENST00000476147 376 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 AC007182.2-201ENST00000489251 402 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 HMGB1P29-201ENST00000505659 499 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.65□□□□□ -1.83
HOXC6P09630 AC016065.2-201ENST00000514530 444 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 RNU6-445P-201ENST00000516949 107 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 RNU6-201P-201ENST00000517100 61 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 MTND1P35-201ENST00000526739 508 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HOXC6P09630 HMGB1P33-201ENST00000563485 527 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXC6P09630 AC034268.2-201ENST00000571784 482 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXC6P09630 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXC6P09630 AC025588.3-201ENST00000604182 274 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 MIR98-201ENST00000606724 119 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 uc_338.1-201ENST00000612113 180 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 AC009318.4-201ENST00000620496 486 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 DUXAP9-208ENST00000622815 614 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 AL137790.1-201ENST00000634283 177 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms