Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC008555.8-201ENST00000623602 2168 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 RNU1-91P-201ENST00000364746 163 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 SNORA48.2-201ENST00000390926 124 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CXCL1P09341 AC016769.3-201ENST00000396562 315 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 AL139098.1-201ENST00000407291 389 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.45□□□□□ -2.18
CXCL1P09341 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 AC093106.2-201ENST00000428212 385 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.45□□□□□ -2.18
CXCL1P09341 THAP5P1-201ENST00000439089 262 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.45□□□□□ -2.18
CXCL1P09341 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.45□□□□□ -2.18
CXCL1P09341 HIGD1AP2-201ENST00000446367 280 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.45□□□□□ -2.18
CXCL1P09341 NDUFA5P7-201ENST00000452914 242 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 MTCO3P11-201ENST00000455103 774 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 LARP1BP2-201ENST00000486594 519 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 MTAPP1-201ENST00000489154 819 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CXCL1P09341 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CXCL1P09341 AC084024.2-201ENST00000503480 791 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CXCL1P09341 COX7A2P2-201ENST00000505291 250 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.45□□□□□ -2.18
CXCL1P09341 AC112518.2-201ENST00000508565 425 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 AC098591.2-201ENST00000510152 315 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CXCL1P09341 MIR892C-201ENST00000516410 77 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.45□□□□□ -2.18
CXCL1P09341 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CXCL1P09341 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.45□□□□□ -2.18
CXCL1P09341 AL133241.1-201ENST00000556832 487 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 AC093510.2-201ENST00000562820 896 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 AC009063.1-201ENST00000563342 702 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.45□□□□□ -2.18
CXCL1P09341 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.45□□□□□ -2.18
CXCL1P09341 AC008121.1-201ENST00000603244 268 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 AC068313.1-201ENST00000604028 1008 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 AC026790.2-201ENST00000606282 430 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 MIR92B-201ENST00000607575 96 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 AP001521.1-201ENST00000609150 300 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 AL589743.7-201ENST00000612637 233 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 U4atac.1-201ENST00000618345 95 ntBASIC1.45□□□□□ -2.18
CXCL1P09341 AC004520.1-201ENST00000608362 1413 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 SNORA16.1-201ENST00000364597 132 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 RNA5SP125-201ENST00000364843 120 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 RNU6-741P-201ENST00000383889 107 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 AL512604.1-201ENST00000404812 257 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.44□□□□□ -2.18
CXCL1P09341 AIMP1P2-201ENST00000425294 312 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.44□□□□□ -2.18
CXCL1P09341 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.44□□□□□ -2.18
CXCL1P09341 AL356320.1-201ENST00000429616 163 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 AL050341.1-201ENST00000447743 313 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 AL500527.1-201ENST00000448532 255 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.44□□□□□ -2.18
CXCL1P09341 MTCO1P42-201ENST00000457379 726 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CXCL1P09341 RPL7P18-201ENST00000478965 734 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.44□□□□□ -2.18
CXCL1P09341 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.44□□□□□ -2.18
CXCL1P09341 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.44□□□□□ -2.18
CXCL1P09341 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.44□□□□□ -2.18
CXCL1P09341 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.44□□□□□ -2.18
CXCL1P09341 RNU6-1256P-201ENST00000516539 103 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.44□□□□□ -2.18
CXCL1P09341 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.44□□□□□ -2.18
CXCL1P09341 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.44□□□□□ -2.18
CXCL1P09341 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.44□□□□□ -2.18
CXCL1P09341 AP003122.3-201ENST00000526316 255 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 AC118273.2-201ENST00000532092 465 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.44□□□□□ -2.18
CXCL1P09341 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC1.44□□□□□ -2.18
CXCL1P09341 EIF4BP1-201ENST00000554881 351 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 OR4K8P-201ENST00000578842 1048 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 MIR3199-1-201ENST00000582434 88 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.44□□□□□ -2.18
CXCL1P09341 AL021997.1-201ENST00000605757 193 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 AC010678.1-201ENST00000614118 713 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 AC010378.1-201ENST00000619270 362 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 AL356266.1-201ENST00000623311 483 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 AC006386.2-201ENST00000624491 75 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 AC012005.1-201ENST00000624575 75 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 AC025048.6-202ENST00000627667 438 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.44□□□□□ -2.18
CXCL1P09341 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CXCL1P09341 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
CXCL1P09341 AC103710.2-202ENST00000641454 2853 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 MTND5P6-201ENST00000422338 1798 ntBASIC1.44□□□□□ -2.18
CXCL1P09341 DBF4P1-201ENST00000412976 1892 ntBASIC1.43□□□□□ -2.18
CXCL1P09341 AC005832.2-201ENST00000538921 1430 ntBASIC1.43□□□□□ -2.18
CXCL1P09341 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.43□□□□□ -2.18
CXCL1P09341 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CXCL1P09341 RNU6-1005P-201ENST00000384519 107 ntBASIC1.43□□□□□ -2.18
CXCL1P09341 RNU2-20P-201ENST00000410425 191 ntBASIC1.43□□□□□ -2.18
CXCL1P09341 SNORD56-201ENST00000413522 71 ntBASIC1.43□□□□□ -2.18
CXCL1P09341 AL445685.2-201ENST00000422551 342 ntBASIC1.43□□□□□ -2.18
CXCL1P09341 AC018630.2-202ENST00000422992 927 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms